Evidence map›Paper›PMID 40894640›Full record

ArticlebioRxiv : the preprint server for biology2025

Adam M Chazin-Gray, Tuscan R Thompson, Edward D B Lopatto, Pearl Magala, Patrick W Erickson, Andrew C Hunt, Anna Manchenko, Pavel Aprikian, Veronika Tchesnokova, Irina Basova and 19 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors.

Adam M Chazin-GrayDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0009-0005-9310-1891
Tuscan R ThompsonDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0009-0003-1876-106X
Edward D B LopattoDepartment of Molecular Microbiology, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-6625-6143
Pearl MagalaDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-5087-3473
Patrick W EricksonDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-4913-2317
Andrew C HuntDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-9620-593X
Anna ManchenkoDepartment of Microbiology, University of Washington, Seattle, WA, USA.ORCID 0000-0001-5982-4504
Pavel AprikianDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0009-0006-2690-1212
Veronika TchesnokovaDepartment of Microbiology, University of Washington, Seattle, WA, USA.ORCID 0000-0002-4235-5796
Irina BasovaDepartment of Microbiology, University of Washington, Seattle, WA, USA.
Denise A SanickDepartment of Molecular Microbiology, Washington University in St. Louis, St. Louis, MO, USA.
Kevin O TamadonfarDepartment of Molecular Microbiology, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-6481-9993
Morgan R TimmDepartment of Molecular Microbiology, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-2947-9508
Jerome S PinknerDepartment of Molecular Microbiology, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0002-7389-7440
Karen W DodsonDepartment of Molecular Microbiology, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0001-7421-9660
Alex KangDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-5487-0499
Emily JoyceDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0009-0007-3230-1341
Asim K BeraDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-9473-2912
Aaron J SchmitzDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0002-8077-6751
Ali H EllebedyDepartment of Pathology and Immunology, Washington University School of Medicine, St Louis, MO, USA.ORCID 0000-0002-6129-2532
Kelli L HvorecnyDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-4609-6170
Mark J CartwrightWyss Institute, Harvard University, Boston, MA, USA.
Andyna VernetWyss Institute, Harvard University, Boston, MA, USA.ORCID 0000-0003-3875-5903
Sarai BardalesWyss Institute, Harvard University, Boston, MA, USA.
Desmond WhiteWyss Institute, Harvard University, Boston, MA, USA.
Rachel E KlevitDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0002-3476-969X
Evgeni V SokurenkoDepartment of Microbiology, University of Washington, Seattle, WA, USA.ORCID 0000-0003-2806-4121
Scott J HultgrenDepartment of Molecular Microbiology, Washington University in St. Louis, St. Louis, MO, USA.ORCID 0000-0001-8785-564X
David BakerDepartment of Biochemistry, University of Washington, Seattle, WA, USA.ORCID 0000-0001-7896-6217

Funding

X-ray Scattering Technology CoreP30GM133893 · NIGMS · BROOKHAVEN SCIENCE ASSOC-BROOKHAVEN LAB · PI Vivian Stojanoff · 2019 to 2026
$38.6M
User Training and OutreachP30GM124165 · NIGMS · CORNELL UNIVERSITY · PI Nozomi Ando, J Christopher Fromme · 2018 to 2026
$34.2M
User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI Gregory L Hura · 2017 to 2026
$28.6M
Rational design and synthesis of small molecule inhibitors targeting unique pathogenic mechanisms in Gram- and Gram+ bacteria important in UTIU19AI157797 · NIAID · WASHINGTON UNIVERSITY · PI HULTGREN, SCOTT J. · 2021 to 2025
$11.4M
CHAPERONE-ASSISTED PILI ASSEMBLY IN PATHOGENIC E. COLIR01AI029549 · NIAID · WASHINGTON UNIVERSITY · PI HULTGREN, SCOTT J., YUAN, PENG · 1991 to 2023
$5.7M
Allosteric adhesins of enterobacterial pathogensR01AI171570 · NIAID · UNIVERSITY OF WASHINGTON · PI Rachel E Klevit, EVGENI Veniaminovic SOKURENKO · 2022 to 2026
$3.5M
Pathogenic Fiber Formation in Bacteria: Structural BasisR37AI048689 · NIAID · WASHINGTON UNIVERSITY · PI SCOTT J. HULTGREN · 2021 to 2026
$2.9M
Optimization of protective antibodies response against bacterial adhesinsR21AI178593 · NIAID · UNIVERSITY OF WASHINGTON · PI CARTWRIGHT, MARK, SOKURENKO, EVGENI VENIAMINOVIC · 2023 to 2024
$485k
Investigating Novel Methods to Combat Urinary Tract InfectionsK99GM141364 · NIGMS · UNIVERSITY OF WASHINGTON · PI MAGALA, PEARL · 2022 to 2023
$225k
Novel therapeutics for treatment of catheter-associated UTI and depletion of the vaginal reservoirF30DK135390 · NIDDK · WASHINGTON UNIVERSITY · PI TIMM, MORGAN ROSE WILT · 2023 to 2025
$123k
NIAID NIH HHS R01 AI029549NIAID NIH HHS R01 AI171570NIAID NIH HHS R21 AI178593NIAID NIH HHS R37 AI048689NIAID NIH HHS U19 AI157797NIDDK NIH HHS F30 DK135390NIGMS NIH HHS K99 GM141364NIGMS NIH HHS P30 GM124165NIGMS NIH HHS P30 GM124169NIGMS NIH HHS P30 GM133893
6 · The paper itself

Abstract

The rise of multidrug-resistant bacterial infections necessitates the discovery of novel antimicrobial strategies. Here, we show that protein design provides a generalizable means of generating new antimicrobials by neutralizing the function of bacterial adhesins, which are virulence factors critical in host-pathogen interactions. We

Identifiers

PMID40894640
PMCPMC12393372

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.