Evidence map›Paper›PMID 40893971›Full record

ArticlemLife2025

Metatranscriptome profile of agricultural microbial communities enriched for plastitrophy.

Fatai A Olabemiwo, Yuting Huang, Macy Thompson, Hanan Omar, Siddhant Kalra, Philip Arevalo, Valerie Nazzaro, Frederick M Cohan

Abstract readLetter
In one paragraph

Article in mLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Fatai A OlabemiwoDepartment of Biology Wesleyan University Middletown Connecticut USA.
Yuting HuangDepartment of Biology Wesleyan University Middletown Connecticut USA.
Macy ThompsonDepartment of Biology Wesleyan University Middletown Connecticut USA.
Hanan OmarDepartment of Biology Wesleyan University Middletown Connecticut USA.
Siddhant KalraDepartment of Biology Wesleyan University Middletown Connecticut USA.
Philip ArevaloDepartment of Biology Wesleyan University Middletown Connecticut USA.
Valerie NazzaroQuantitative Analysis Center (QAC) Wesleyan University Middletown Connecticut USA.
Frederick M CohanDepartment of Biology Wesleyan University Middletown Connecticut USA.ORCID https://orcid.org/0000-0001-6705-6314

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

This study identified potential plastic-degrading microorganisms and enzymes in agricultural soils using a novel two-phase enrichment approach. By culturing agricultural soil in a Winogradsky column supplemented with polyethylene (PE) sheets, followed by culture in minimal medium with low-density polyethylene (LDPE) microplastic, we identified 192 genes specifically upregulated in LDPE conditions, including 10 genes encoding known plastizymes and 182 genes encoding putative plastic-degrading enzymes. Detailed enzyme classification revealed predominant roles for oxygenases (20%) and dehydrogenases (19%), with specific subclasses showing distinct distribution patterns. These findings expand our understanding of microbial responses to plastics in agricultural environments and provide a foundation for developing bioremediation strategies to address plastic contamination in soils.

Identifiers

PMID40893971
PMCPMC12396202

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.