Evidence map›Paper›PMID 40890620›Full record

ArticleBMC microbiology2025

The frequency distribution of Aspergillus section Nigri from clinical and environmental samples in Iran.

Sara Hamzehee, Maral Gharaghani, Seyed Hamid Borsi, Hadis Jafarian, Gholam Ali Jalaee, Maryam Kardooni, Ali Zarei-Mahmoudabadi

Abstract read
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Prevalence ofJournal of fungi (Basel, Switzerland) · 2026
    Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sara HamzeheeDepartment of Medical Mycology, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran.ORCID 0009-0006-6956-712X
Maral GharaghaniMedicinal Plants Research Center, Yasouj University of Medical Sciences, Yasouj, Iran.ORCID 0000-0002-0144-3407
Seyed Hamid BorsiDepartment of Internal Medicine, Air Pollution and Respiratory Diseases Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran.
Hadis JafarianClinical Microbiology Research Center, Shiraz University of Medical Sciences, Shiraz, Iran.ORCID 0000-0002-8959-6482
Gholam Ali JalaeeOtorhinolaryngologist, Apadana Hospital, Sorosh Street, Ahvaz, Iran.
Maryam KardooniDepartment of ENT, Hearing & Speech Research Center, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran.
Ali Zarei-MahmoudabadiDepartment of Medical Mycology, School of Medicine, Ahvaz Jundishapur University of Medical Sciences, Ahvaz, Iran. zarei40@hotmail.com.ORCID 0000-0002-5347-2082

Funding

Ahvaz Jundishapur University of Medical Sciences OG- 0208
6 · The paper itself

Abstract

backgroundAspergillus section Nigri is widely distributed in decaying plant materials in our environment. Although most of these species are known for food spoilage and some have industrial applications, some of these species, including Aspergillus tubingensis, A. welwitschiae, and A. niger, are etiologic agents of human and animal aspergillosis. Moreover, the frequency of each species in different environments is correlated with meteorological conditions. The present study aimed to investigate the frequency of Aspergillus section Nigri in clinical samples and environmental sources in several Iranian provinces.

methodsA total of 629 samples, including 261 clinical materials and 368 environmental materials, were collected from seven Iranian provinces. The Aspergillus section Nigri was initially screened on the basis of colony morphology and then subjected to sequencing via the calmodulin (CaM) gene. Maximum likelihood phylogenies were constructed via MEGA 11 software.

resultsOf the 192 Aspergillus section Nigri isolates, 41.15% were identified as A. tubingensis, followed by A. welwitschiae (35.94%), A. niger (sensu stricto) (17.71%), A. neoniger (1.56%), A. piperis (1.56%), A. aculeatus (1.04%), and A. luchuensis (1.04%). The most prevalent species were A. tubingensis and A. welwitschiae from clinical and environmental samples, respectively. In addition, the frequency of these species varied across Iranian provinces.

conclusionsThis study determined the presence and frequency, distribution, and phylogenetic relationships of eight black aspergilli, A. tubingensis, A. welwitschiae, A. niger, A. neoniger, A. piperis, A. aculeatus, and A. luchuensis, associated with clinical and environmental samples from several Iranian provinces. In terms of the source of isolation, A. tubingensis was most common in the both environmental and clinical samples, whereas A. welwitschiae was most common in the clinical samples.

Indexed as

AspergillosisAspergillusEnvironmental MicrobiologyAnimalsCalmodulinDNA, FungalHumansIranPhylogenySequence Analysis, DNACalmodulinDNA, FungalAspergillus section NigriA. tubingensisA. welwitschiaeCalmodulin geneIranMolecular identification

Identifiers

PMID40890620
PMCPMC12400643

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.