Evidence map›Paper›PMID 40890536›Full record

ArticleNature metabolism2025

ATF6 activation alters colonic lipid metabolism causing tumour-associated microbial adaptation.

Olivia I Coleman, Adam Sorbie, Alessandra Riva, Miriam von Stern, Stephanie Kuhls, Denise M Selegato, Luisa Siegert, Isabel Keidel, Nikolai Köhler, Jakob Wirbel and 26 more

Abstract read
In one paragraph

Article in Nature metabolism, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Review
  2. Review
  3. Review
  4. Article
  5. IntratumoralFrontiers in immunology · 2026
    Article
  6. Review
  7. Review
  8. Article
  9. Review
  10. Protein misfolding in β-cell failure.Nature reviews. Endocrinology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Olivia I Coleman *Chair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.ORCID http://orcid.org/0000-0002-4075-7820
Adam Sorbie *Chair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.ORCID http://orcid.org/0000-0002-3330-4612
Alessandra RivaChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.ORCID http://orcid.org/0000-0002-5724-7616
Miriam von SternChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.
Stephanie KuhlsChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.
Denise M SelegatoMolecular Systems Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.
Luisa SiegertChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.
Isabel KeidelChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.ORCID http://orcid.org/0009-0000-9806-1087
Nikolai KöhlerLipiTUM, Chair of Experimental Bioinformatics, School of Life Sciences Weihenstephan, Technische Universität München, Freising-Weihenstephan, Munich, Germany.ORCID http://orcid.org/0000-0002-5103-883X
Jakob WirbelStructural and Computational Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-4073-3562
Tim KacprowskiDivision Data Science in Biomedicine, Peter L. Reichertz Institute for Medical Informatics of TU Braunschweig and Hannover Medical School, Braunschweig, Germany.ORCID http://orcid.org/0000-0002-5393-2413
Andreas DunkelChair of Food Chemistry and Molecular Sensory Science, School of Life Sciences, Technische Universität München, München, Germany.
Josch K PaulingLipiTUM, Chair of Experimental Bioinformatics, School of Life Sciences Weihenstephan, Technische Universität München, Freising-Weihenstephan, Munich, Germany.
Johannes PlaggeZIEL Institute for Food & Health, Research Group Lipid Metabolism, Technische Universität München, Freising, Germany.
Diego Mediel-CuadraHelmholtz AI, Helmholtz Munich, Neuherberg, Germany.
Sophia J WagnerHelmholtz AI, Helmholtz Munich, Neuherberg, Germany.
Ines ChadlyChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.
Sandra BierwithChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany.
Tingying PengHelmholtz AI, Helmholtz Munich, Neuherberg, Germany.
Thomas MetzlerComparative Experimental Pathology (CEP), School of Medicine and Health, Technische Universität München, Munich, Germany.ORCID http://orcid.org/0000-0002-1620-5559
Xin LiDivision of Chronic Inflammation and Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany.
Mathias HeikenwälderDivision of Chronic Inflammation and Cancer, German Cancer Research Center (DKFZ), Heidelberg, Germany.ORCID http://orcid.org/0000-0002-3135-2274
Clemens SchafmayerDepartment of General Surgery, University Hospital Rostock, Rostock, Germany.
Sebastian HinzDepartment of General Surgery, University Hospital Rostock, Rostock, Germany.
Christian RöderInstitute for Experimental Cancer Research, University Medical Center Schleswig-Holstein, Kiel, Germany.
Christoph RöckenDepartment of Pathology, Christian-Albrechts University, Kiel, Germany.
Michael ZimmermannMolecular Systems Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-5797-3589
Philip RosenstielInstitute of Clinical Molecular Biology, University hospital Schleswig-Holstein, Campus Kiel and Kiel University, Kiel, Germany.ORCID http://orcid.org/0000-0002-9692-8828
Katja SteigerComparative Experimental Pathology (CEP), School of Medicine and Health, Technische Universität München, Munich, Germany.ORCID http://orcid.org/0000-0002-7269-5433
Moritz JesinghausInstitute of Pathology, Universitätsklinikum Marburg, Baldingerstraße, Marburg, Germany.
Gerhard LiebischInstitute of Clinical Chemistry and Laboratory Medicine, University Hospital Regensburg, Regensburg, Germany.ORCID http://orcid.org/0000-0003-4886-0811
Josef EckerZIEL Institute for Food & Health, Research Group Lipid Metabolism, Technische Universität München, Freising, Germany.ORCID http://orcid.org/0000-0003-4799-0788
Christina SchmidtFaculty of Medicine and Heidelberg University Hospital, Institute for Computational Biomedicine, Heidelberg University, Heidelberg, Germany.ORCID http://orcid.org/0000-0002-3867-0881
Georg ZellerMolecular Systems Biology Unit, European Molecular Biology Laboratory, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-1429-7485
Klaus-Peter JanssenDepartment of Surgery, Klinikum rechts der Isar, Technische Universität München, München, Germany.ORCID http://orcid.org/0000-0002-4707-7887
Dirk HallerChair of Nutrition and Immunology, School of Life Sciences, Technische Universität München, Freising-Weihenstephan, Munich, Germany. dirk.haller@tum.de.ORCID http://orcid.org/0000-0002-6977-4085

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) 395357507Deutsche Forschungsgemeinschaft (German Research Foundation) 441891347
6 · The paper itself

Abstract

Endoplasmic reticulum unfolded protein responses contribute to cancer development, with activating transcription factor 6 (ATF6) involved in microbiota-dependent tumorigenesis. Here we show the clinical relevance of ATF6 in individuals with early-onset and late colorectal cancer, and link ATF6 signalling to changes in lipid metabolism and intestinal microbiota. Transcriptional analysis in intestinal epithelial cells of ATF6 transgenic mice (nATF6

Indexed as

Activating Transcription Factor 6ColonColorectal NeoplasmsGastrointestinal MicrobiomeLipid MetabolismAnimalsFatty AcidsFemaleHumansMaleMiceMice, TransgenicSignal TransductionActivating Transcription Factor 6ATF6 protein, humanFatty Acids

Identifiers

PMID40890536
PMCPMC12460170

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.