Evidence map›Paper›PMID 40889156›Full record

ArticleNucleic acids research2025

SMAD3 and p300 complex scaffolding by long non-coding RNA LIMD1-AS1 promotes TGF-β-induced breast cancer cell plasticity.

Chuannan Fan, Davy Cats, Miriam Selle, Olga Khorosjutina, Soniya Dhanjal, Bernhard Schmierer, Hailiang Mei, Peter Ten Dijke, Qian Wang

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Chuannan FanOncode Institute and Department of Cell and Chemical Biology, Leiden University Medical Center,Leiden, 2300 RC, the Netherlands.ORCID 0000-0001-8754-4913
Davy CatsDepartment of Biomedical Data Sciences, Sequencing Analysis Support Core, Leiden University Medical Center, Leiden, 2300 RC, the Netherlands.ORCID 0000-0001-9684-220X
Miriam SelleDepartment of Medical Biochemistry and Biophysics, SciLifeLab and Karolinska Institute, Solna, 171 65, Sweden.
Olga KhorosjutinaDepartment of Medical Biochemistry and Biophysics, SciLifeLab and Karolinska Institute, Solna, 171 65, Sweden.
Soniya DhanjalDepartment of Medical Biochemistry and Biophysics, SciLifeLab and Karolinska Institute, Solna, 171 65, Sweden.
Bernhard SchmiererDepartment of Medical Biochemistry and Biophysics, SciLifeLab and Karolinska Institute, Solna, 171 65, Sweden.
Hailiang MeiDepartment of Biomedical Data Sciences, Sequencing Analysis Support Core, Leiden University Medical Center, Leiden, 2300 RC, the Netherlands.ORCID 0000-0003-1781-5508
Peter Ten DijkeOncode Institute and Department of Cell and Chemical Biology, Leiden University Medical Center,Leiden, 2300 RC, the Netherlands.ORCID 0000-0002-7234-342X
Qian WangOncode Institute and Department of Cell and Chemical Biology, Leiden University Medical Center,Leiden, 2300 RC, the Netherlands.

Funding

ZonMw 09120012010061
6 · The paper itself

Abstract

Transforming growth factor (TGF)-β signaling enhances cancer cell plasticity by inducing epithelial-to-mesenchymal transition (EMT). Here, we identified a TGF-β-induced long non-coding RNA, LIMD1 Antisense RNA 1 (LIMD1-AS1) that strengthens the SMAD-mediated transcriptional response to TGF-β. LIMD1-AS1 expression is upregulated in breast cancer tissues compared to normal breast tissues, and high LIMD1-AS1 expression is associated with poor prognosis in breast cancer patients. Depletion of LIMD1-AS1 hinders TGF-β-induced EMT, migration, and extravasation of breast cancer cells. Mechanistically, LIMD1-AS1 promotes the interaction between SMAD3 and its transcriptional coactivator p300, thereby enhancing SMAD3 transcriptional activity and TGF-β/SMAD signaling. We demonstrated that LIMD1-AS1 binds to the MAD homology 2 (MH2) domain of SMAD3 and the interferon-binding domain (IBiD) of p300. Displacing LIMD1-AS1 from p300 by its competitor interferon regulatory factor 3 (IRF3) suppressed the effects of LIMD1-AS1 on potentiating TGF-β/SMAD signaling. Furthermore, blockage of p300 acetyltransferase activity with a pharmacological inhibitor A-485 reduced the ability of LIMD1-AS1 to enhance SMAD3 transcriptional activity, TGF-β-induced EMT, and migration. This study identifies LIMD1-AS1 as a novel stimulator of TGF-β signaling by establishing a positive feedback loop and highlights its potential as a therapeutic target for breast cancer.

Indexed as

Breast NeoplasmsCell PlasticityE1A-Associated p300 ProteinRNA, Long NoncodingSmad3 ProteinTransforming Growth Factor betaAnimalsCell Line, TumorCell MovementEpithelial-Mesenchymal TransitionFemaleGene Expression Regulation, NeoplasticHumansMCF-7 Cellsp300-CBP Transcription FactorsSignal TransductionE1A-Associated p300 ProteinEP300 protein, humanp300-CBP Transcription FactorsRNA, Long NoncodingSmad3 ProteinSMAD3 protein, humanTransforming Growth Factor beta

Identifiers

PMID40889156
PMCPMC12400928

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.