Evidence map›Paper›PMID 40884650›Full record

ReviewMethods in molecular biology (Clifton, N.J.)2025

Artificial Intelligence and Chromothripsis.

Davide Callegarin, Nada Maaziz, Anne-Laure Mosca, Nathalie Marle, Mélodie Opale, Christophe Nicolle, Patrick Callier

Abstract readReview
PubMed Publisher
In one paragraph

Review in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Davide CallegarinLaboratoire de Génétique Chromosome et Moléculaire, équipe DIAD (Développement de l'Intelligence artificielle au CHU de Dijon), CHU Dijon, France.
Nada MaazizLaboratoire de Génétique Chromosome et Moléculaire, équipe DIAD (Développement de l'Intelligence artificielle au CHU de Dijon), CHU Dijon, France.
Anne-Laure MoscaLaboratoire de Génétique Chromosome et Moléculaire, équipe DIAD (Développement de l'Intelligence artificielle au CHU de Dijon), CHU Dijon, France.
Nathalie MarleLaboratoire de Génétique Chromosome et Moléculaire, équipe DIAD (Développement de l'Intelligence artificielle au CHU de Dijon), CHU Dijon, France.
Mélodie OpaleLaboratoire de Génétique Chromosome et Moléculaire, équipe DIAD (Développement de l'Intelligence artificielle au CHU de Dijon), CHU Dijon, France.
Christophe NicolleLaboratoire CIAD (Connaissances et Intelligence Artificielle Distribuées), UMR 7533, Univ. Bourgogne Franche-Comté, UB, Dijon, France.
Patrick CallierLaboratoire de Génétique Chromosome et Moléculaire, équipe DIAD (Développement de l'Intelligence artificielle au CHU de Dijon), CHU Dijon, France. patrick.callier@chu-dijon.fr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Artificial intelligence (AI) emerges as a new alternative in the healthcare domain, particularly in genomics, promising to revolutionize medicine with its various applications. In this chapter, we explore the potential of AI in genetics and research, with a particular focus on its role in the detection and characterization of chromothripsis. Chromothripsis, marked by complex genomic rearrangements, presents significant challenges in detection and interpretation. Traditional methods such as karyotyping, FISH, array-CGH, and NGS have limitations in accurately identifying chromothripsis events. However, recent advances in AI, including deep learning and machine learning, offer promising opportunities to overcome these challenges. By utilizing machine learning and deep learning algorithms, researchers can analyze complex genomic datasets, identify recurrent patterns, and predict functional consequences associated with chromothripsis with unprecedented accuracy. Additionally, AI facilitates the integration of multi-omics data, enabling a holistic understanding of chromothripsis in various pathological contexts. Through case studies and recent advancements, we highlight the potential of AI in advancing our understanding of chromothripsis and its clinical applications.

Indexed as

Artificial IntelligenceChromothripsisGenomicsAlgorithmsComputational BiologyDeep LearningHumansMachine LearningArtificial intelligenceChromothripsisWhole genome sequencing

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.