Evidence map›Paper›PMID 40884642›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Hybrid Sequencing Characterization of Complex Chromosomal Rearrangements.

Anna Lindstrand, Jesper Eisfeldt

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Anna LindstrandDepartment of Clinical Genetics and Genomics, Karolinska University Hospital, Stockholm, Sweden. anna.lindstrand@ki.se.
Jesper EisfeldtDepartment of Molecular Medicine and Surgery, Center for Molecular Medicine, Karolinska Institutet, Stockholm, Sweden.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Complex chromosomal rearrangements (CCRs), defined as structural variants involving more than two chromosomes or multiple breakpoint junctions, are challenging to resolve, and causal mutations often go unnoticed in genome studies. Short-read whole-genome sequencing enables the characterization of rearrangement junctions in unique sequences. However, issues persist within repetitive regions of the genome, which are prone to rearrangements. Therefore, complementary genome sequencing technologies may be required to solve the structures of CCRs.Hybrid sequencing, which combines multiple genome sequencing datasets from the same individual, results in a more complete representation of the genome. This approach enhances the ability to resolve rearrangement structures and map breakpoint junctions more accurately.

Indexed as

Chromosome AberrationsGene RearrangementHigh-Throughput Nucleotide SequencingSequence Analysis, DNAWhole Genome SequencingChromosome BreakpointsGenome, HumanHumansDe novo assemblyGenomeHi-CLong-read genome sequencingPangenomeShort-read genome sequencing

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.