Evidence map›Paper›PMID 40883672›Full record

ArticleBMC plant biology2025

Molecular insights into drought tolerance in wheat through in-silico genome-wide analysis of DREB1 transcription factor and peroxidase interactions.

Lubaba Komal, Atif Kamran, Summera Jahan, Waheed Akram, Manzer H Siddiqui, Saud Alamri, Muhammad Shakir

Abstract read
In one paragraph

Article in BMC plant biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Wheat Drought Management: A Broader Prospect.Plants (Basel, Switzerland) · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Lubaba KomalInstitute of Botany, Quaid-e-Azam Campus, University of the Punjab, Lahore, 54000, Pakistan.
Atif KamranInstitute of Botany, Quaid-e-Azam Campus, University of the Punjab, Lahore, 54000, Pakistan. atif.botany@pu.edu.pk.
Summera JahanInstitute of Botany, Quaid-e-Azam Campus, University of the Punjab, Lahore, 54000, Pakistan.
Waheed AkramDepartment of Plant Pathology, Quaid-e-Azam Campus, University of the Punjab, Lahore, 54000, Pakistan.
Manzer H SiddiquiDepartment of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia.
Saud AlamriDepartment of Botany and Microbiology, College of Science, King Saud University, P.O. Box 2455, Riyadh, 11451, Saudi Arabia.
Muhammad ShakirSchool of Life Sciences, Northeast Normal University, Changchun, China.

Funding

Higher Education Commission (HEC) of Pakistan for providing funds for NRPU research project (Grant Number 20-16716) 20-16716Researchers Supporting Project number (RSP2025R347), King Saud University, Riyadh, Saudi Arabia RSP2025R347
6 · The paper itself

Abstract

Wheat (Triticum aestivum) is a staple food crop providing essential nutrition to global population. However, water scarcity and increasing drought stress, because of climate change, threaten its productivity. Oxidative stress increases the production of reactive oxygen species (ROS) due to drought which damages the plant cellular metabolism. Plants counteract this by regulating the transcription of enzymes like catalases, peroxidases, and superoxide dismutase. This research investigated activated biochar's (AB) role on wheat cultivars under deficit irrigation. Activated biochar significantly reduced lipid peroxidation (27-56%) while increasing antioxidant activities (40-60%) under low irrigation as compared to the control (no biochar), suggesting its potential to improve drought resilience. Peroxidase, for presenting significantly higher antioxidant activity, was selected as a key enzyme for molecular docking. Protein-protein interactions between the DREB1 transcription factor and peroxidase, supported by hydrogen bonding, electrostatic interactions, and hydrophobic forces, highlighted the role of biochar mediated peroxidase in oxidative stress response. This interaction highlighted the role of DREB1 in drought resilience, presenting a range of protein sizes, isoelectric points, and stability indices across TaDREB proteins in the wheat genome. Subcellular localization analysis demonstrated that most TaDREB genes, particularly DREB1, are active in the nucleus. At the same time, some are localized to chloroplasts and mitochondria, suggesting diverse roles in stress response and energy metabolism. Phylogenetic analysis grouped DREB genes from wheat (TaDREB), maize (ZmDREB), and Arabidopsis (AtDREB), indicating conserved evolutionary functions across monocot and dicot species. Motif and domain prediction revealed conserved AP2 domains across TaDREB genes, emphasizing their structural and functional conservation, which likely evolved through gene expansion to enhance stress tolerance. These findings are crucial for understanding biochemical attributes of drought responsive transcription factors and their interactive response with antioxidants, which can further help in gene editing technology.

Indexed as

DroughtsPeroxidasePlant ProteinsTranscription FactorsTriticumAntioxidantsDrought ResistanceGenome, PlantGenome-Wide Association StudyMolecular Docking SimulationOxidative StressAntioxidantsPeroxidasePlant ProteinsTranscription FactorsAntioxidantsLipid peroxidationPhylogenySubcellular localizationTaDREBTranscription factors

Identifiers

PMID40883672
PMCPMC12395770

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.