Evidence map›Paper›PMID 40883420›Full record

ArticleScientific reports2025

Solvent-driven spectroscopic and quantum chemical evaluation of 2-[(trimethylsilyl) ethynyl]thiophene with molecular docking insights.

Vaithilingam Sasikala, Saminathan Kayarohanam, Vadivelu Balachandran, Merfat S Al-Sharif, Samy F Mahmoud, Natarajan Elangovan, Ling Shing Wong, Sinouvassane Djearamane

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Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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2 · The registry

The trial behind it

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3 · Its place in the literature

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors.

Vaithilingam SasikalaDepartment of Physics, Shrimati Indira Gandhi College (Affiliated to Bharathidasan University), Tiruchirappalli, 620 002, India.
Saminathan KayarohanamFaculty of Bioeconomics and Health Sciences, University Geomatika Malaysia, 54200, Kuala Lumpur, Malaysia.
Vadivelu BalachandranDepartment of Physics, Arignar Anna Government Arts College (Affiliated to Bharathidasan University), Musri, Tiruchirappalli, 621 021, India. brsbala@rediffmail.com.
Merfat S Al-SharifDepartment of Chemistry, College of Science, Taif University, P.O.Box 11099, 21944, Taif, Saudi Arabia.
Samy F MahmoudDepartment of Biotechnology, College of Science, Taif University, Taif city, Saudi Arabia.
Natarajan ElangovanCentre for Global Health Research, Saveetha Medical College, Saveetha Institute of Medical and Technical Sciences, Chennai, 602105, India. drelangovanchem@gmail.com.
Ling Shing WongFaculty of Health and Life Sciences, INTI International University, 71800, Nilai, Malaysia.
Sinouvassane DjearamaneDepartment of Biomedical Science, Faculty of Science, University Tunku Abdul Rahman, Jalan University, Bandar Barat, 31900, Kampar, Malaysia. sinouvassane@utar.edu.my.

Funding

Taif University, Saudi Arabia TU-DSPP-2025-16
6 · The paper itself

Abstract

Thiophene derivatives are recognised for their notable biological and pharmacological properties. This study examines the electronic structure and antibacterial properties of 2-[(Trimethylsilyl)ethynyl]thiophene (2TSET), emphasising the effects of solvent environments. We utilised spectroscopic techniques such as Fourier transform infrared (FT-IR), ultraviolet-visible (UV-Vis), and Raman spectroscopy (FT-Raman) to verify the molecular geometry of 2TSET. The vibrational behaviour was analysed using generalised quantum mechanical force field methods. The electronic properties, including frontier molecular orbitals (HOMO-LUMO), were analysed in gas and different solvent phases to assess intramolecular charge transfer. The electronic structure was examined through projected density of states (PDOS) and crystal orbital overlap population (COOP) analyses to evaluate orbital contributions and bonding interactions. Molecular electrostatic potential (MEP), electron localisation function (ELF), and localised orbital locator (LOL) maps were employed to identify chemically reactive sites across various phase conditions. The compound's drug-likeness was assessed through ADMET profiling and bioactivity scoring. Molecular docking studies demonstrated favourable binding interactions, with the highest binding energy underscoring the potential of 2TSET as an antibacterial agent. Among the tested compound (2TSET) exhibited the highest binding affinity toward 2J6M and 3ERT, with a docking score of -4.9 kcal/mol and - 4.6 kcal/mol, indicating strong potential for inhibitory activity.

Indexed as

DockingPharmacologicalSolvation studyStructural analysisTopology

Identifiers

PMID40883420
PMCPMC12397284

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