Evidence map›Paper›PMID 40883407›Full record

ArticleCommunications biology2025

Poultry farm density and proximity drive highly pathogenic avian influenza spread.

Claire Guinat, Cecilia Valenzuela Agüí, François-Xavier Briand, Debapriyo Chakraborty, Lisa Fourtune, Sébastien Lambert, Andrea Jimenez Pellicer, Severine Rautureau, Guillaume Gerbier, Louis du Plessis and 4 more

Abstract read
In one paragraph

Article in Communications biology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
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  5. Review
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Claire GuinatInteractions Hôtes-Agents Pathogènes (IHAP), Université de Toulouse, INRAE, ENVT, Toulouse, France. claire.guinat@envt.fr.ORCID http://orcid.org/0000-0002-8245-9290
Cecilia Valenzuela Agüí *Department of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.ORCID https://orcid.org/0000-0002-2774-4822
François-Xavier Briand *French Agency for Food, Environmental and Occupational Health & Safety (ANSES) Laboratory of Ploufragan-Plouzané-Niort, Ploufragan, France.ORCID https://orcid.org/0000-0002-8094-9368
Debapriyo ChakrabortyInteractions Hôtes-Agents Pathogènes (IHAP), Université de Toulouse, INRAE, ENVT, Toulouse, France.ORCID https://orcid.org/0000-0003-2777-8923
Lisa FourtuneInteractions Hôtes-Agents Pathogènes (IHAP), Université de Toulouse, INRAE, ENVT, Toulouse, France.ORCID https://orcid.org/0000-0002-9481-3461
Sébastien LambertInteractions Hôtes-Agents Pathogènes (IHAP), Université de Toulouse, INRAE, ENVT, Toulouse, France.ORCID http://orcid.org/0000-0001-6901-373X
Andrea Jimenez PellicerDirection Générale de l'Alimentation (DGAL), Ministère de l'Agriculture et la Souveraineté Alimentaire, Paris, France.
Severine RautureauDirection Générale de l'Alimentation (DGAL), Ministère de l'Agriculture et la Souveraineté Alimentaire, Paris, France.
Guillaume GerbierDirection Générale de l'Alimentation (DGAL), Ministère de l'Agriculture et la Souveraineté Alimentaire, Paris, France.
Louis du PlessisDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.ORCID http://orcid.org/0000-0003-0352-6289
Tanja StadlerDepartment of Biosystems Science and Engineering, ETH Zürich, Basel, Switzerland.ORCID http://orcid.org/0000-0001-6431-535X
Beatrice GraslandFrench Agency for Food, Environmental and Occupational Health & Safety (ANSES) Laboratory of Ploufragan-Plouzané-Niort, Ploufragan, France.ORCID https://orcid.org/0000-0001-5777-673X
Mathilde C PaulInteractions Hôtes-Agents Pathogènes (IHAP), Université de Toulouse, INRAE, ENVT, Toulouse, France.ORCID https://orcid.org/0000-0003-2940-8547
Timothée VergneInteractions Hôtes-Agents Pathogènes (IHAP), Université de Toulouse, INRAE, ENVT, Toulouse, France.ORCID https://orcid.org/0000-0002-1146-9256

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The continuous spread of highly pathogenic avian influenza H5 viruses poses significant challenges, particularly in regions with high poultry farm densities where conventional control measures are less effective. Using phylogeographic and phylodynamic tools, we analysed virus spread in southwestern France in 2020 and 2021, a region with recurrent outbreaks. Following a single introduction, the virus spread regionally, mostly affecting duck farms, with an average velocity of 10.5 km/week and a peak at 27.8 km/week in mid-December. The effective reproduction number between farms (R

Indexed as

ChickensFarmsInfluenza A virusInfluenza in BirdsPoultry DiseasesAnimal HusbandryAnimalsDisease OutbreaksDucksFrancePoultry

Identifiers

PMID40883407
PMCPMC12397219

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.