Evidence map›Paper›PMID 40883297›Full record

ArticleNature communications2025

Unique plastisphere viromes with habitat-dependent potential for modulating global methane cycle.

Xue-Peng Chen, Dong Zhu, Shu-Yue Liu, Ming-Ming Sun, Mao Ye, Lu Wang, Da Lin, Tian-Lun Zhang, Matthias C Rillig, Yong-Guan Zhu

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xue-Peng ChenDepartment of Environmental Science and Engineering, University of Science and Technology of China, Hefei, 230026, China.
Dong ZhuState Key Laboratory of Regional and Urban Ecology, Ningbo Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China. dzhu@iue.ac.cn.ORCID http://orcid.org/0000-0002-0826-6423
Shu-Yue LiuNational Engineering Research Center for Soil Nutrient Management and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China.
Ming-Ming SunSoil Ecology Lab, Nanjing Agricultural University, Nanjing, 210095, China.ORCID http://orcid.org/0000-0002-5550-6813
Mao YeNational Engineering Research Center for Soil Nutrient Management and Pollution Remediation, Institute of Soil Science, Chinese Academy of Sciences, Nanjing, 210008, China.
Lu WangState Key Laboratory of Regional and Urban Ecology, Ningbo Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China.
Da LinState Key Laboratory of Regional and Urban Ecology, Ningbo Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China.
Tian-Lun ZhangState Key Laboratory of Regional and Urban Ecology, Ningbo Observation and Research Station, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, 361021, China.
Matthias C RilligInstitute of Biology, Freie Universität Berlin, Berlin, 14195, Germany.ORCID http://orcid.org/0000-0003-3541-7853
Yong-Guan ZhuDepartment of Environmental Science and Engineering, University of Science and Technology of China, Hefei, 230026, China. ygzhu@rcees.ac.cn.ORCID http://orcid.org/0000-0003-3861-8482

Funding

National Natural Science Foundation of China (National Science Foundation of China) 42021005
6 · The paper itself

Abstract

Plastispheres, novel niches in the Anthropocene, harbor microbial communities with unique functional signatures. As the most abundant biological entity on Earth, viruses are key regulators of microbial community composition and metabolism. However, little is known about viral communities and their functions in the plastisphere. Here, we investigate the composition and functional profile of plastisphere viral communities through microcosm experiments combined with global plastisphere metagenomics data. We find that the plastisphere recruits a distinct viral community with 86.9% novel viral operational taxonomic units compared to control substrates. The plastisphere viral community modulates host methane metabolism through auxiliary metabolic genes and distinctive interactions with hosts. These auxiliary metabolic genes for methane cycling are prevalent in global plastisphere viral communities. Notably, the plastisphere microbiome adopts the life history strategy of copiotrophs in the nutrient-poor water environment, making the water plastisphere a potential hot spot for methane emission compared to the soil plastisphere. Our phage transplantation experiments reveal that lysogenic viruses significantly contribute to enhancing the methanogenic capacity of microorganisms and promoting methane emission of the water plastisphere. Overall, we decipher the role of viruses in the plastisphere and reinforce the necessity of incorporating viral contributions when assessing the effects of plastisphere communities on global biogeochemical cycles.

Indexed as

EcosystemMethaneMicrobiotaViromeBacteriaMetagenomicsSoil MicrobiologyMethane

Identifiers

PMID40883297
PMCPMC12397222

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.