Evidence map›Paper›PMID 40883030›Full record

ArticleCancer genomics & proteomics

Analysis of Peroxisomal ABCD3 Transporter as a Prognostic Factor in Clear Cell Renal Cell Carcinoma.

Simone Heyliger, Tamiel N Turley, Tracoyia Roach, Marilyn D Saulsbury, Equar Taka, Jordan P Reynolds, John A Copland, Adam M Kase, R Renee Reams

Abstract read
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Article in Cancer genomics & proteomics. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

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0cells of the map it votes in
2citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Simone HeyligerSchool of Pharmacy, Department of Pharmaceutical Sciences Hampton University, Hampton, VA, U.S.A.
Tamiel N TurleyCancer Biology Department, Mayo Clinic, Jacksonville, FL, U.S.A.
Tracoyia RoachCollege of Pharmacy & Pharmaceutical Sciences, Florida A&M University, Tallahassee, FL, U.S.A.
Marilyn D SaulsburySchool of Pharmacy, Department of Pharmaceutical Sciences Hampton University, Hampton, VA, U.S.A.
Equar TakaCollege of Pharmacy & Pharmaceutical Sciences, Florida A&M University, Tallahassee, FL, U.S.A.
Jordan P ReynoldsDepartment of Laboratory Medicine and Pathology, Mayo Clinic, Jacksonville, FL, U.S.A.
John A CoplandCancer Biology Department, Mayo Clinic, Jacksonville, FL, U.S.A.
Adam M Kase *Hematology/Oncology Division, Internal Medicine Department, Mayo Clinic Comprehensive Cancer Center, Mayo Clinic, Jacksonville, FL, U.S.A. kase.adam@mayo.edu.
R Renee Reams *College of Pharmacy & Pharmaceutical Sciences, Florida A&M University, Tallahassee, FL, U.S.A.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND/

aimClear cell renal cell carcinoma (ccRCC) is among the 10 most common cancers diagnosed in the United States. Despite its severity and aggressive nature, biomarkers that can serve as prognostic and predictive factors for ccRCC are lacking. ABCD3, a peroxisomal long-chain fatty acid transporter, has been shown to serve as a prognostic factor in both prostate and colon cancers. Thus, this study aimed to ascertain if ABCD3, which is highly expressed in kidney tissues, may also serve as a biomarker for renal cancer. MATERIALS AND

methodsBioinformatics and immunohistochemical staining were employed to systematically investigate the relationship between the ABCD3 gene and protein expression, the immune microenvironment, and survival outcomes in ccRCC. We extensively harnessed data from publicly available databases, including The Cancer Genome Atlas (TGCA), UALCAN, Gene Set Cancer Analysis, UCSC Xena, and various other databases.

results

conclusionOur findings suggest that ABCD3 is a novel biomarker for ccRCC and that the downregulation of ABCD3 expression, and other members of the peroxisomal VLCFA oxidation pathway may represent a unique molecular feature of ccRCC.

Indexed as

ATP-Binding Cassette TransportersBiomarkers, TumorCarcinoma, Renal CellKidney NeoplasmsPeroxisomesAgedFemaleGene Expression Regulation, NeoplasticHumansMaleMiddle AgedPrognosisABCD3 protein, humanATP-Binding Cassette TransportersBiomarkers, TumorABCD3clear cell renal carcinomalipid transportperoxisometumor suppression

Identifiers

PMID40883030
PMCPMC12402713

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.