Evidence map›Paper›PMID 40881967›Full record

ArticleIEEE Winter Conference on Applications of Computer Vision. IEEE Winter Conference on Applications of Computer Vision2024

AnyStar: Domain randomized universal star-convex 3D instance segmentation.

Neel Dey, S Mazdak Abulnaga, Benjamin Billot, Esra Abaci Turk, P Ellen Grant, Adrian V Dalca, Polina Golland

Abstract read
In one paragraph

Article in IEEE Winter Conference on Applications of Computer Vision. IEEE Winter Conference on Applications of Computer Vision, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Learning General-Purpose Biomedical Volume Representations using Randomized Synthesis.... International Conference on Learning Representations · 2025
    Article
  7. Synthetic data in generalizable, learning-based neuroimaging.Imaging neuroscience (Cambridge, Mass.) · 2024
    Article
  8. Review
  9. Shape-aware Segmentation of the Placenta in BOLD Fetal MRI Time Series.The journal of machine learning for biomedical imaging · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Neel DeyMIT CSAIL.
S Mazdak AbulnagaMIT CSAIL.
Benjamin BillotMIT CSAIL.
Esra Abaci TurkBoston Children's Hospital, Harvard Medical School.
P Ellen GrantBoston Children's Hospital, Harvard Medical School.
Adrian V DalcaMIT CSAIL.
Polina GollandMIT CSAIL.

Funding

Training and DisseminationP41EB015902 · NIBIB · BRIGHAM AND WOMEN'S HOSPITAL · PI WESTIN, CARL-FREDRIK · 2012 to 2022
$20.9M
Novel MRI Assessment of Placental Structure and Function Throughout PregnancyR01HD100009 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI ADALSTEINSSON, ELFAR, GRANT, PATRICIA ELLEN · 2019 to 2023
$3.6M
Deep Learning Algorithms for FreeSurferR01AG064027 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI FISCHL, BRUCE · 2020 to 2024
$3.4M
Fetal MRI: robust self-driving brain acquisition and body movement quantificationR01EB032708 · NIBIB · BOSTON CHILDREN'S HOSPITAL · PI ADALSTEINSSON, ELFAR, GRANT, PATRICIA ELLEN · 2022 to 2025
$2.8M
Diagnosing the undiagnosable: studies of Alzheimer disease mimics and confounders via "neuropathometry" of dissection photos with 3D scanningR01AG070988 · NIA · MASSACHUSETTS GENERAL HOSPITAL · PI IGLESIAS GONZALEZ, JUAN EUGENIO · 2021 to 2025
$2.7M
Characterizing the Relationship between Uterine Activity and Placental Function Across Pregnancy with MRIR21HD106553 · NICHD · BOSTON CHILDREN'S HOSPITAL · PI ABACI TURK, ESRA · 2022 to 2023
$497k
NIA NIH HHS R01 AG064027NIA NIH HHS R01 AG070988NIBIB NIH HHS P41 EB015902NIBIB NIH HHS R01 EB032708NICHD NIH HHS R01 HD100009NICHD NIH HHS R21 HD106553
6 · The paper itself

Abstract

Star-convex shapes arise across bio-microscopy and radiology in the form of nuclei, nodules, metastases, and other units. Existing instance segmentation networks for such structures train on densely labeled instances for each dataset, which requires substantial and often impractical manual annotation effort. Further, significant reengineering or finetuning is needed when presented with new datasets and imaging modalities due to changes in contrast, shape, orientation, resolution, and density. We present AnyStar, a domain-randomized generative model that simulates synthetic training data of blob-like objects with randomized appearance, environments, and imaging physics to train general-purpose star-convex instance segmentation networks. As a result, networks trained using our generative model do not require annotated images from unseen datasets. A single network trained on our synthesized data accurately 3D segments C. elegans and P. dumerilii nuclei in fluorescence microscopy, mouse cortical nuclei in

Identifiers

PMID40881967
PMCPMC12381811

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.