Evidence map›Paper›PMID 40881405›Full record

ArticleJACS Au2025

A Deep Learning-Augmented Density Functional Framework for Reaction Modeling with Chemical Accuracy.

Jin Xiao, Yingfeng Zhang, Bowen Li, Shuwen Zhang, Ya Gao, Wei Chen, Han Wang, John Z H Zhang, Tong Zhu

Abstract read
In one paragraph

Article in JACS Au, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jin XiaoShanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China.
Yingfeng ZhangFaculty of Synthetic Biology, Shenzhen University of Advanced Technology, Shenzhen 518055, China.ORCID https://orcid.org/0000-0001-7052-6081
Bowen LiShanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China.ORCID https://orcid.org/0009-0004-7863-8247
Shuwen ZhangShanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China.
Ya GaoSchool of Mathematics, Physics and Statistics, Shanghai University of Engineering Science, Shanghai 201620, China.
Wei ChenDepartment of Chemistry, National University of Singapore, Singapore 117551, Singapore.ORCID https://orcid.org/0000-0002-1131-3585
Han WangLaboratory of Computational Physics, Institute of Applied Physics and Computational Mathematics, Beijing 100088, China.ORCID https://orcid.org/0000-0001-5623-1148
John Z H ZhangFaculty of Synthetic Biology, Shenzhen University of Advanced Technology, Shenzhen 518055, China.ORCID https://orcid.org/0000-0003-4612-1863
Tong ZhuShanghai Engineering Research Center of Molecular Therapeutics and New Drug Development, School of Chemistry and Molecular Engineering, East China Normal University, Shanghai 200062, China.ORCID https://orcid.org/0000-0001-7472-3736

Funding

Malaria Vaccines: Pfs25-rEPA/ALHYDROGELZ01AI001009 · NIAID · NIAID EXTRAMURAL ACTIVITIES · PI MILLER, LOUIS · 2007 to 2008
$1.0M
Intramural NIH HHS Z01 AI001009
6 · The paper itself

Abstract

Accurate prediction of reaction energetics remains a fundamental challenge in computational chemistry, as conventional density functional theory (DFT) often fails to reconcile high accuracy with computational efficiency. Here, we introduce Deep post-Hartree-Fock (DeePHF), a machine learning framework that integrates neural networks with quantum mechanical descriptors to achieve CCSD-(T)-level precision while retaining the efficiency of DFT to solve the reaction problems. By establishing a direct mapping between the eigenvalues of local density matrices and high-level correlation energies, DeePHF circumvents the traditional accuracy-scalability tradeoff. Trained on a limited data set of small-molecule reactions, our model demonstrates superior performance across multiple benchmark data sets, exhibiting exceptional transferability. In fact, its accuracy even surpasses that of advanced double-hybrid functionals, all while maintaining O-(N

Indexed as

barrier heightchemical reactionsDFTmachine learningreaction energy

Identifiers

PMID40881405
PMCPMC12381711

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.