Evidence map›Paper›PMID 40880534›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

TIGER: A tdTomato in vivo genome-editing reporter mouse for investigating precision-editor delivery approaches.

Samuel W Du, Grazyna Palczewska, Zhiqian Dong, Julie C Lauterborn, Balasankara Reddy Kaipa, Alexander L Yan, Rafał Hołubowicz, Siyoung Ha, Paul Z Chen, Christine M Gall and 3 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. TIGER: A tdTomato in vivo genome-editing reporter mouse for investigating precision-editor delivery approaches.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Samuel W DuGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.ORCID 0000-0002-9655-3659
Grazyna PalczewskaGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.
Zhiqian DongGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.
Julie C LauterbornDepartment of Anatomy and Neurobiology, School of Medicine, University of California Irvine, Irvine, CA 92697.
Balasankara Reddy KaipaGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.
Alexander L YanGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.ORCID 0000-0002-8594-7994
Rafał HołubowiczGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.
Siyoung HaGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.
Paul Z ChenMerkin Institute of Transformative Technologies in Healthcare, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142.
Christine M GallDepartment of Anatomy and Neurobiology, School of Medicine, University of California Irvine, Irvine, CA 92697.ORCID 0000-0002-7727-796X
Gulab ZodeGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.ORCID 0009-0005-9472-9373
David R LiuMerkin Institute of Transformative Technologies in Healthcare, Broad Institute of Massachusetts Institute of Technology and Harvard, Cambridge, MA 02142.
Krzysztof PalczewskiGavin Herbert Eye Institute-Robert M. Brunson Center for Translational Vision Research, Department of Ophthalmology and Visual Sciences, University of California Irvine, Irvine, CA 92697.ORCID 0000-0002-0788-545X

Funding

Center for Genomic Editing and Recording: Development and Application of Next-Generation Genome and Epigenome Editing Methods to Advance the Study and Treatment of Human DiseaseRM1HG009490 · NHGRI · WHITEHEAD INSTITUTE FOR BIOMEDICAL RES · PI Brittany S. Adamson, Martin Joseph Ankrah Aryee · 2017 to 2026
$22.7M
STRUCTURAL STUDIES OF ARRESTINSR01EY009339 · NEI · UNIVERSITY OF WASHINGTON · PI KISER, PHILIP DAVID, PALCZEWSKI, KRZYSZTOF · 1992 to 2025
$16.0M
MEDICAL SCIENTIST TRAINING PROGRAMT32GM008620 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI GOLDIN, ALAN L · 1999 to 2023
$8.1M
Integrating Chemistry and Evolution to Illuminate Biology and Enable Novel TherapeuticsR35GM118062 · NIGMS · HARVARD UNIVERSITY · PI LIU, DAVID R · 2016 to 2025
$6.4M
Precision genome editing in vivo to treat retinal diseasesR01EY034501 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Audrone Lapinaite, Krzysztof Palczewski · 2023 to 2026
$3.9M
Crosstalk Between Unfolded Protein Response and Autophagy for the Treatment of GlaucomaR01EY026177 · NEI · UNIVERSITY OF NORTH TEXAS HLTH SCI CTR · PI ZODE, GULAB · 2016 to 2025
$3.8M
NEI UCI Center Core Grant for Vision ResearchP30EY034070 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Vladimir Jivkov Kefalov · 2022 to 2026
$3.7M
Postnatal Oxytocin Treatment and Cognitive Function in FragileXR01HD101642 · NICHD · UNIVERSITY OF CALIFORNIA-IRVINE · PI GALL, CHRISTINE M, LYNCH, GARY S · 2021 to 2025
$2.5M
Delivery Technologies for In Vivo Genome EditingUG3AI150551 · NIAID · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CHAIKOF, ELLIOT · 2019 to 2021
$2.3M
Expanding the Scope of Base EditingU01AI142756 · NIAID · BROAD INSTITUTE, INC. · PI LIU, DAVID R · 2018 to 2022
$2.1M
Editing AMD Risk Alleles in Human CellsR01EY036994 · NEI · UNIVERSITY OF IOWA · PI Robert Foster Mullins, Krzysztof Palczewski · 2025 to 2026
$1.2M
microRNA-204 and microRNA-211 regulation of RPE phagocytosisF30EY033642 · NEI · UNIVERSITY OF CALIFORNIA-IRVINE · PI Samuel Wang Du · 2022 to 2026
$241k
Canadian Government | Natural Sciences and Engineering Research Council of Canada (NSERC) N/AHHMI (HHMI) HHMIHHS | NIH (NIH) F30EY033642HHS | NIH (NIH) P30EY034070HHS | NIH (NIH) R01EY026177HHS | NIH (NIH) R01EY034501HHS | NIH (NIH) R01EY036994HHS | NIH (NIH) R01HD101642HHS | NIH (NIH) R35GM118062HHS | NIH (NIH) RM1HG009490HHS | NIH (NIH) T32GM008620HHS | NIH (NIH) U01AI142756HHS | NIH (NIH) UG3AI150551Knights Templar Eye Foundation (KTEF) Career-Starter Research GrantsNEI NIH HHS F30 EY033642NEI NIH HHS P30 EY034070NEI NIH HHS R01 EY009339NEI NIH HHS R01 EY026177NEI NIH HHS R01 EY034501NEI NIH HHS R01 EY036994NHGRI NIH HHS RM1 HG009490NIAID NIH HHS U01 AI142756NIAID NIH HHS UG3 AI150551NICHD NIH HHS R01 HD101642NIGMS NIH HHS R35 GM118062NIGMS NIH HHS T32 GM008620Research to Prevent Blindness (RPB) Unrestricted
6 · The paper itself

Abstract

In vivo genome editing has the potential to address many inherited and environmental disorders. However, a major hurdle for the clinical translation of genome editing is safe, efficient delivery to disease-relevant tissues. A modality-agnostic reporter animal model that facilitates rapid, precise, and quantifiable assessment of functional delivery and editing could greatly enhance the evaluation and translation of delivery technologies. Here, we present the development of the tdTomato in vivo genome-editing reporter (TIGER) mouse, a reporter strain that harbors an integrated and constitutively expressed mutated tdTomato gene in the

Indexed as

Gene EditingGenes, ReporterLuminescent ProteinsAnimalsCRISPR-Cas SystemsGenetic VectorsGene Transfer TechniquesIndolesMiceMice, TransgenicRed Fluorescent ProteinIndolesLuminescent ProteinsRed Fluorescent ProteintdTomatobase editingCRISPRgenome editingprime editingreporter

Identifiers

PMID40880534
PMCPMC12415246

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.