Evidence map›Paper›PMID 40878557›Full record

ArticleJournal of microbiology (Seoul, Korea)2025

Rubrivirga aquatilis sp. nov. and Rubrivirga halophila sp. nov., isolated from Korean coastal surface seawater.

Jisoo Han, Yeonjung Lim, Mirae Kim, Jang-Cheon Cho

Abstract read
In one paragraph

Article in Journal of microbiology (Seoul, Korea), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jisoo HanDepartment of Biological Sciences and Bioengineering, Inha University, Incheon 22212, Republic of Korea.
Yeonjung LimDepartment of Biological Sciences and Bioengineering, Inha University, Incheon 22212, Republic of Korea.
Mirae KimDepartment of Biological Sciences and Bioengineering, Inha University, Incheon 22212, Republic of Korea.
Jang-Cheon ChoDepartment of Biological Sciences and Bioengineering, Inha University, Incheon 22212, Republic of Korea.

Funding

Honam National Institute of Biological Resources HNIBR202301211Honam National Institute of Biological Resources HNIBR202501213Ministry of Sciences and ICTNational Research Foundation of Korea 2022R1A2C3008502
6 · The paper itself

Abstract

Two Gram-stain-negative, obligately aerobic, non-motile, short rod-shaped bacteria, designated IMCC43871T and IMCC45206T, were isolated from coastal surface seawater collected from the Yellow Sea and the South Sea of Korea, respectively. The two strains shared 99.2% 16S rRNA gene sequence similarity with each other and exhibited ≤ 98.4% similarity to three described Rubrivirga species. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between IMCC43871T and IMCC45206T were 88.5% and 36.3%, respectively, confirming that they represent two distinct species. Their ANI (≤ 77.7%) and dDDH (≤ 21.4%) values relative to the type strains of the genus Rubrivirga further supported the recognition of strains IMCC43871T and IMCC45206T as two novel species within the genus. The complete genomes of IMCC43871T (4.17 Mb, 71.8% G + C content) and IMCC45206T (4.17 Mb, 72.8% G + C content) fall within the known genomic range of the genus. Cellular fatty acid, quinone, and polar lipid profiles were consistent with the chemotaxonomic features of the genus Rubrivirga, supporting their affiliation with the genus. Based on phylogenetic, genomic, and phenotypic evidence, strains IMCC43871T and IMCC45206T are proposed as two novel species, Rubrivirga aquatilis sp. nov. and Rubrivirga halophila sp. nov., respectively. The type strains are IMCC43871T (= KCTC 102072T = NBRC 116463T) and IMCC45206T (= KCTC 92925T = NBRC 116172T = CCTCC AB 2023136T).

Indexed as

Gram-Negative BacteriaSeawaterGenome, BacterialPhylogenyRNA, BacterialRNA, Ribosomal, 16SRNA, BacterialRNA, Ribosomal, 16Sgenomemarine bacterianovel speciespolyphasic taxonomyRubrivirga aquatilisRubrivirga halophila

Identifiers

PMID40878557
PMCPMC13577104

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.