Evidence map›Paper›PMID 40877296›Full record

ArticleScientific data2025

Transcriptome profiling of mRNA and lncRNA involved in wax biosynthesis in cauliflower.

Kanghua Du, Yirong Li, Lingmin Wang, Da Zhang, Jixian Ma, Lingfeng Bao, Zhengfu Tang, Jie Zhang, Wanfu Mu, Long Yang

Abstract readDataset
In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Kanghua Du *Institute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China.ORCID 0000-0003-2028-0882
Yirong Li *Institute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China.
Lingmin Wang *Yiliang County Agricultural Science and Technology Extension Service Centre, Kunming, Yunnan, 652100, China.
Da ZhangInstitute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China.
Jixian MaInstitute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China.
Lingfeng BaoInstitute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China.
Zhengfu TangInstitute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China.
Jie ZhangCollege of Landscape and Horticulture, Yunnan Agricultural University, Kunming, Yunnan, 650201, China. zhangjie@ynau.edu.cn.
Wanfu MuInstitute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China. sinongmwf@126.com.
Long YangInstitute of Tropical Eco-agriculture Science, Yunnan Academy of Agricultural Sciences, Yuanmou, Yunnan, 651300, China. colinsir@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The leaf wax layer in cauliflower (Brassica oleracea var. Botrytis L.) and other Brassica crops play an important role in environmental adaptation and defense. Here, high-throughput RNA sequencing was performed on leaves of a wax-deficient mutant type (WL) and its wild type (YL). A total of 43.13 Gb of raw RNA-seq data was obtained, of which 42.38 Gb of high-quality clean reads were retained after quality control. A total of 24,529 genes and 1,092 long non-coding RNA (lncRNA) were identified through transcriptome assembly and annotation. Functional enrichment analysis indicated that these mRNA and lncRNA are associated with biotic stress responses, lipid biosynthesis, and fatty acid degradation pathways. This study provides valuable transcriptomic resources for the wax deficiency of cauliflower and lays a foundation for future research on genetic improvement and breeding strategies.

Indexed as

BrassicaRNA, Long NoncodingRNA, MessengerTranscriptomeWaxesGene Expression ProfilingPlant LeavesRNA, Long NoncodingRNA, MessengerWaxes

Identifiers

PMID40877296
PMCPMC12394716

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.