Evidence map›Paper›PMID 40873941›Full record

ArticleIEEE transactions on network science and engineering

Uncertainty Quantification of Network Inference with Data Sufficiency.

Bharat Singhal, Jorge Luis Ocampo-Espindola, K L Nikhil, Erik D Herzog, István Z Kiss, Jr-Shin Li

Abstract read
In one paragraph

Article in IEEE transactions on network science and engineering. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Bharat SinghalDepartment of Electrical and Systems Engineering, Washington University in St Louis, St. Louis, Missouri 63130, USA.
Jorge Luis Ocampo-EspindolaDepartment of Chemistry, Saint Louis University, St. Louis, Missouri 63103, USA.
K L NikhilDepartment of Biology, Washington University in St. Louis, St. Louis, Missouri 63130, USA.
Erik D HerzogDepartment of Biology, Washington University in St. Louis, St. Louis, Missouri 63130, USA.
István Z KissDepartment of Chemistry, Saint Louis University, St. Louis, Missouri 63103, USA.
Jr-Shin LiDepartment of Electrical and Systems Engineering, Washington University in St Louis, St. Louis, Missouri 63130, USA.

Funding

Collaborative Research: Inferring Dynamic Topology to Decode and Control Spatiotemporal Structures in Complex NetworksR01GM131403 · NIGMS · WASHINGTON UNIVERSITY · PI LI, JR-SHIN · 2018 to 2021
$1.6M
Functional Connectivity in the Circadian ClockR01NS139415 · NINDS · WASHINGTON UNIVERSITY · PI Erik Herzog · 2024 to 2026
$1.6M
DMS/NIGMS 2: Moment Kernel Machines for Decoding Complexity in Dynamic Biological NetworksR01GM157609 · NIGMS · WASHINGTON UNIVERSITY · PI Jr-Shin Li · 2024 to 2026
$1.2M
NIGMS NIH HHS R01 GM131403NIGMS NIH HHS R01 GM157609NINDS NIH HHS R01 NS139415
6 · The paper itself

Abstract

Network inference, which involves reconstructing the connectivity structure of a network from recorded data, is essential for broadening our understanding of physical, biological, and chemical systems. Although data-driven network inference algorithms have made significant strides in recent years, determining how much data is required so that the inferred network topology faithfully mirrors the underlying network remains an essential but often overlooked subject. In this paper, we present a statistical method to determine whether the recorded data carries sufficient variability to ensure an accurate reconstruction of the true network topology. Our approach leverages parametric confidence intervals to establish the bounds of true connection strengths, which subsequently enable the uncertainty quantification of inferred connectivity. The proposed technique is validated using noisy data generated from networks of Kuramoto and Stuart-Landau oscillators. Additionally, the method is applied to experimentally obtained data from an electrochemical oscillator network, where we find that the data sufficiency technique can successfully predict the accuracy of the inferred network.

Indexed as

Confidence intervalsNetwork inferenceNetwork topologyNonlinear oscillators

Identifiers

PMID40873941
PMCPMC12380119

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.