Evidence map›Paper›PMID 40868994›Full record

ArticleInternational journal of molecular sciences2025

Computational Profiling of Monoterpenoid Phytochemicals: Insights for Medicinal Chemistry and Drug Design Strategies.

André Nogueira Cardeal Dos Santos, Paulo Elesson Guimarães de Oliveira, José Ednésio da Cruz Freire, Sara Araújo Dos Santos, José Eduardo Ribeiro Honório Júnior, Claudia Roberta de Andrade, Bruno Lopes de Sousa, Wildson Max Barbosa da Silva, Ariclécio Cunha de Oliveira, Vânia Marilande Ceccatto and 3 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. L-Type Voltage-Gated CaMedical sciences (Basel, Switzerland) · 2026
    Article
  3. Anxiolytic-Like Effect ofACS omega · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

André Nogueira Cardeal Dos SantosExperimental Physiology Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.ORCID 0009-0002-7008-8901
Paulo Elesson Guimarães de OliveiraBiochemistry and Gene Expression Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.
José Ednésio da Cruz FreireBiochemistry and Gene Expression Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.ORCID 0000-0002-0660-0459
Sara Araújo Dos SantosBiochemistry and Signal Transduction Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.
José Eduardo Ribeiro Honório JúniorNeuroscience and Translational Medicine Laboratory, Christus University Center-Unichristus, Fortaleza 60190-180, CE, Brazil.
Claudia Roberta de AndradeNeuroscience and Translational Medicine Laboratory, Christus University Center-Unichristus, Fortaleza 60190-180, CE, Brazil.
Bruno Lopes de SousaBiochemistry and Signal Transduction Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.ORCID 0000-0002-0689-0898
Wildson Max Barbosa da SilvaNatural Products Chemistry Laboratory, State University of Ceará, Fortaleza 60714-903, CE, Brazil.
Ariclécio Cunha de OliveiraEndocrine and Metabolism Physiology Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.ORCID 0000-0002-9295-8157
Vânia Marilande CeccattoBiochemistry and Gene Expression Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.ORCID 0000-0003-4839-4400
José Henrique Leal CardosoElectrophysiology Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.ORCID 0000-0002-3972-1361
Adélia Justina Aguiar AquinoDepartment of Mechanical Engineering, Texas Tech University, Lubbock, TX 79409, USA.
Andrelina Noronha Coelho de SousaExperimental Physiology Laboratory, Superior Institute of Biomedical Sciences, State University of Ceará, Fortaleza 60714-903, CE, Brazil.ORCID 0000-0002-7357-0958

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Monoterpenoids are a structurally diverse class of natural products with a long-standing history of therapeutic use. Despite their promising bioactivities, their clinical development has been limited by dose-dependent toxicities, poor pharmacokinetics, and suboptimal drug-like properties. In this work, a comprehensive in silico pipeline was employed to evaluate 1175 monoterpenoid compounds retrieved from ChEBI, aiming to identify structurally diverse candidates that possess favorable drug-like characteristics. A total of 54 molecular parameters were calculated using thirteen computational tools, covering physicochemical parameters, ADMET profiles, and toxicological risk assessments. Stepwise filtering was employed to retain only compounds meeting stringent thresholds across multiple domains, followed by chemoinformatic analysis. Structure-activity relationship mapping and target prediction were subsequently conducted to explore mechanistic plausibility. This workflow led to the identification of seven top-performing monoterpenoids that exhibited ideal physicochemical profiles, high gastrointestinal absorption, low predicted toxicity, and full compliance with medicinal chemistry rules. Notably, target prediction revealed a convergence on GPCRs, enzymatic and nuclear receptors, highlighting potential anti-inflammatory and neuromodulatory effects. The identification of conserved pharmacophores across selected scaffolds further reinforces their translational potential. Our results highlight the value of multi-parameter computational triage in natural product drug discovery and reveal a subset of overlooked monoterpenoids with promising preclinical applications.

Indexed as

Drug DesignMonoterpenesPhytochemicalsCheminformaticsChemistry, PharmaceuticalComputational BiologyComputer SimulationDrug DiscoveryHumansStructure-Activity RelationshipMonoterpenesPhytochemicalsADME and toxicological predictiondrug-likenessmonoterpenoidsstructure–activity relationshiptarget prediction

Identifiers

PMID40868994
PMCPMC12386793

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.