Evidence map›Paper›PMID 40867054›Full record

ArticleNucleic acids research2025

Single-molecule fluorescence reveals the DNA unwinding mechanism of mitochondrial helicase TWINKLE and its interplay with single-stranded DNA-binding proteins.

Hsin-Yi Wang, Ying-Ying Lee, Po-Jung Chien, Wen-An Tsai, Pei-Jia Sun, Li-Ting Wang, Chyuan-Chuan Wu, Hsiu-Fang Fan

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Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

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3citing papers in PubMed
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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Hsin-Yi WangInstitute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, 804, Taiwan.
Ying-Ying LeeInstitute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, 804, Taiwan.
Po-Jung ChienInstitute of Basic Medical Sciences, College of Medicine, National Cheng Kung University, Tainan, 701, Taiwan.
Wen-An TsaiInstitute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, 804, Taiwan.
Pei-Jia SunInstitute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, 804, Taiwan.
Li-Ting WangDepartment of Biochemistry and Molecular Biology, College of Medicine, National Cheng Kung University, Tainan, 701, Taiwan.
Chyuan-Chuan WuDepartment of Biochemistry and Molecular Biology, College of Medicine, National Cheng Kung University, Tainan, 701, Taiwan.ORCID 0000-0002-7389-8777
Hsiu-Fang FanInstitute of Medical Science and Technology, National Sun Yat-sen University, Kaohsiung, 804, Taiwan.ORCID 0000-0002-4870-351X

Funding

National Science and Technology Council NSTC 112-2636-B-006-005National Science and Technology Council NSTC 113-2113-M-110-015National Science and Technology Council NSTC113-2639-M-A49-002-ASPNational Science and Technology Council NSTC 114-2113-M-110-005National Sun Yat-sen University
6 · The paper itself

Abstract

The mitochondrial DNA helicase TWINKLE, a hexameric ring-shaped helicase, plays a crucial role in maintaining mitochondrial DNA integrity. TWINKLE translocates along one DNA strand, unwinding the duplex by excluding the complementary strand through coordinated ATP hydrolysis. However, the precise mechanisms underlying this process remain incompletely understood. In this study, we utilized single-molecule Förster Resonance Energy Transfer (smFRET) to investigate the mechanisms of TWINKLE-mediated DNA unwinding. Our results reveal that TWINKLE occasionally pauses during unwinding, with the rate of unwinding and the duration of pausing strongly influenced by ATP concentration, but not by the presence of DNA mismatches or mitochondrial single-stranded DNA-binding protein (mtSSB). These findings suggest that the pausing events primarily arise from stochastic ATP hydrolysis within the helicase subunits. DNA mismatches exacerbate TWINKLE's pausing and dissociation from DNA, thereby impairing DNA unwinding. In contrast, mtSSB significantly mitigates helicase dissociation by stabilizing TWINKLE-DNA interactions. This study provides novel insights into the functional dynamics of TWINKLE, highlighting the role of ATP hydrolysis in orchestrating single-stranded DNA translocation, the detrimental effects of DNA mismatches on DNA unwinding, and the critical role of mtSSB in supporting helicase function.

Indexed as

DNA-Binding ProteinsDNA HelicasesDNA, MitochondrialDNA, Single-StrandedMitochondrial ProteinsAdenosine TriphosphateFluorescence Resonance Energy TransferHumansHydrolysisMitochondriaProtein BindingSingle Molecule ImagingAdenosine TriphosphateDNA-Binding ProteinsDNA HelicasesDNA, MitochondrialDNA, Single-StrandedMitochondrial ProteinsTWNK protein, human

Identifiers

PMID40867054
PMCPMC12390753

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.