Evidence map›Paper›PMID 40864240›Full record

ArticleArchives of virology2025

Comparison of the genomes of Vibrio phages pVco-5 and pVco-7: implications for phage-host interactions.

Hyoun Joong Kim, Jun Kwon, Chan Hee Lee, Ji Hyung Kim, Se Chang Park, Sang Guen Kim

Abstract readComparative Study
PubMed Publisher
In one paragraph

Article in Archives of virology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Hyoun Joong KimDepartment of Aquatic Life Medical Sciences, Sunmoon University, 31460, Asan, Republic of Korea.
Jun KwonLaboratory of Veterinary Public Health, College of Veterinary Medicine, Jeonbuk National University, 54596, Iksan, Republic of Korea.
Chan Hee LeeDepartment of Veterinary Medicine & Public Health, Armed Forces Medical Research Institute, Daejeon, Republic of Korea.
Ji Hyung KimDepartment of Food Science and Biotechnology, Gachon University, 13120, Seongnam, Republic of Korea.
Se Chang ParkLaboratory of Aquatic Biomedicine, College of Veterinary Medicine and Research Institute for Veterinary Science, Seoul National University, 08826, Seoul, Republic of Korea. parksec@snu.ac.kr.
Sang Guen KimLaboratory of Phage and Microbial Resistance, Department of Biological Sciences, Kyonggi University, 16227, Suwon, Republic of Korea. imagine0518@kyonggi.ac.kr.ORCID http://orcid.org/0000-0001-5352-4914

Funding

Ministry of Education RS-2021-NR062056Ministry of Education RS-2022-NR075245
6 · The paper itself

Abstract

Oyster hatcheries suffer significant mortality caused by members of the bacterial genus Vibrio, which infect Crassostrea gigas larvae. Bacteriophages present a potential alternative to antibiotics, with N4-like phages showing promise against vibriosis. We investigated the adsorption properties and determined the complete genome sequence of phage pVco-7 and performed phylogenetic and comparative analysis with other N4-like Vibrio phages to gain insights into phage resistance mechanisms and infection strategies. The phage has a linear dsDNA genome with 126 genes and a typical N4-like organization. Tail fiber variations were identified that could potentially influence host recognition, providing insights into how phages of the genus Vicoquintavirus interact with their host as well as their evolutionary relationships. These findings will contribute to the development effective biocontrol strategies against vibriosis in commercially important bivalve aquaculture.

Indexed as

BacteriophagesDNA VirusesGenome, ViralVibrioAnimalsCrassostreaPhylogenyViral Tail ProteinsViral Tail ProteinsBacteriophageCrassostrea gigasN4-like phagePhage resistanceVibrio coralliilyticusVibriosis

Identifiers

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.