Evidence map›Paper›PMID 40860016›Full record

ArticleNational science review2025

Synergizing a knowledge graph and large language model for relay catalysis pathway recommendation.

Fei Fu, Qing-Qing Li, Fangrong Wang, Jie Hu, Tian-Tian Wang, Yun-Pei Liu, Weihong Xu, Zhili Lin, Fu-Qiang Gong, Qi-Yuan Fan and 3 more

Abstract read
In one paragraph

Article in National science review, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Leveraging Large Language Models for Understanding Fundamental Principles of Catalysis.The journal of physical chemistry. C, Nanomaterials and interfaces · 2026
    Review
  3. Article
  4. Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Fei FuState Key Laboratory of Physical Chemistry of Solid Surface, iChEM, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
Qing-Qing LiState Key Laboratory of Physical Chemistry of Solid Surface, iChEM, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
Fangrong WangSchool of Informatics, The University of Edinburgh, Edinburgh EH8 9AB, UK.
Jie HuInstitute of Artificial Intelligence, Xiamen University, Xiamen 361005, China.
Tian-Tian WangInstitute of Artificial Intelligence, Xiamen University, Xiamen 361005, China.
Yun-Pei LiuState Key Laboratory of Physical Chemistry of Solid Surface, iChEM, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
Weihong XuLaboratory of AI for Electrochemistry (AI4EC), Tan Kah Kee Innovation Laboratory (IKKEM), Xiamen 361100, China.
Zhili LinLaboratory of AI for Electrochemistry (AI4EC), Tan Kah Kee Innovation Laboratory (IKKEM), Xiamen 361100, China.
Fu-Qiang GongState Key Laboratory of Physical Chemistry of Solid Surface, iChEM, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
Qi-Yuan FanState Key Laboratory of Physical Chemistry of Solid Surface, iChEM, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
Jeff Z PanSchool of Informatics, The University of Edinburgh, Edinburgh EH8 9AB, UK.
Ye WangState Key Laboratory of Physical Chemistry of Solid Surface, iChEM, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.
Jun ChengState Key Laboratory of Physical Chemistry of Solid Surface, iChEM, College of Chemistry and Chemical Engineering, Xiamen University, Xiamen 361005, China.ORCID https://orcid.org/0000-0001-6971-0797

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Relay catalysis integrates multiple catalytic reactions to efficiently transform intermediates and enhance conversion and selectivity. However, designing these pathways and multifunctional catalysts is often lengthy and costly, heavily relying on in-depth literature analysis by experienced researchers. To address this, we developed an approach that combines a knowledge graph (KG) and large language models (LLMs) to automatically recommend multistep catalytic reaction pathways. Our method involves using an LLM-assisted workflow for data acquisition and organization, followed by the construction of a detailed catalysis knowledge graph (Cat-KG). After querying the Cat-KG, promising relay catalysis pathways are identified by applying scoring rules informed by expertise in relay catalysis. The LLM then transforms the structured pathways and reaction condition data into readable chemical equations and descriptions for chemists. This step integrates catalysis knowledge from the Cat-KG and helps avoid LLM-induced hallucinations by using reliable information. The method efficiently recommended relay catalysis pathways for ethylene, ethanol, 2,5-furandicarboxylate and other targets within minutes, identifying pathways consistent with reported ones while using different reaction conditions, validating its effectiveness. Thus, this strategy can extrapolate known and novel relay catalysis pathways, showcasing its potential for application in pathway selection.

Indexed as

generative pre-trained transformerknowledge graphlarge language modelrelay catalysis

Identifiers

PMID40860016
PMCPMC12374726

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.