Evidence map›Paper›PMID 40859138›Full record

ArticleBMC microbiology2025

Diversity and dynamics of fungal endophytes in the roots of Amomum villosum lour. Under different areas and growth ages.

Xiao-Gang Li, Xiao-Xu You, Xing-Kai Zhang, Di Chen, Sen He, Guan-Hua Cao

Abstract read
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Xiao-Gang LiSchool of Chinese Materia Medica and Chinese Pharmaceutical Research International Science and Technology Cooperation Base of Yunnan University of Chinese Medicine, Kunming, 650500, Yunnan, China.
Xiao-Xu YouSchool of Chinese Materia Medica and Chinese Pharmaceutical Research International Science and Technology Cooperation Base of Yunnan University of Chinese Medicine, Kunming, 650500, Yunnan, China.
Xing-Kai ZhangSchool of Chinese Materia Medica and Chinese Pharmaceutical Research International Science and Technology Cooperation Base of Yunnan University of Chinese Medicine, Kunming, 650500, Yunnan, China.
Di ChenSchool of Chinese Materia Medica and Chinese Pharmaceutical Research International Science and Technology Cooperation Base of Yunnan University of Chinese Medicine, Kunming, 650500, Yunnan, China.
Sen HeSchool of Chinese Materia Medica and Chinese Pharmaceutical Research International Science and Technology Cooperation Base of Yunnan University of Chinese Medicine, Kunming, 650500, Yunnan, China. senhe2019@outlook.com.
Guan-Hua CaoSchool of Chinese Materia Medica and Chinese Pharmaceutical Research International Science and Technology Cooperation Base of Yunnan University of Chinese Medicine, Kunming, 650500, Yunnan, China. caoguanhua2019@outlook.com.

Funding

Key project at central government level: The ability establishment of sustainable use for valuable Chinese medicine resources 2060302-2404-05National Natural Science Foundation of China 82360750, 82260743Ten Thousand Talent Plans for Young Top-notch Talents of Yunnan Province YNWR-QNBJ-2020-279the Yunnan Fundamental Research Projects 202501AS070141Young Talents Special Project of Yunnan "Xingdian Talent Support Program" XDYC-QNRC-2023-0526Yunnan Key Laboratory of Southern Medicinal Utilization 202105AG070012XS25031Yunnan Provincial Science and Technology Department- Applied Basic Research Joint Special Funds of Chinese Medicine 202001AZ070001-009
6 · The paper itself

Abstract

This study aims to investigate the colonization and diversity of endophytic fungi in Amomum villosum roots across different planting locations and at various growth ages, and to analyze the fungal composition. In this study, we performed Illumina-based ITS sequencing to investigate the effects of growth ages and sample plots on the rhizosphere fungi of A. villosum. Colonization analysis revealed widespread colonization by arbuscular mycorrhizal fungi (AMF) and dark septate endophytes (DSEs), but colonization rates did not increase significantly with plant age. Glomus was the dominant AMF genus, while Exophiala, Cladosporium and Cladophialophora dominated the DSE community. Beneficial fungi included Phoma, Acremonium, Myrothecium and Trichoderma. Alpha and beta diversity analyses indicated that fungal diversity, abundance, and community composition were significantly influenced by planting location but not by plant age. Collectively, planting location drives divergent root fungal communities in A. villosum, while plant age selectively affects specific taxa. AMF and DSEs were considered to be dominant beneficial microorganisms and were largely responsible for the growth and development of A. villosum. This study provides valuable insights for identifying beneficial endophytic fungi in A. villosum and optimizes the application of AMF and DSE agents in its ecological cultivation.

Indexed as

BiodiversityEndophytesFungiPlant RootsDNA, FungalMycorrhizaePhylogenyRhizosphereSequence Analysis, DNASoil MicrobiologyDNA, FungalArbuscular mycorrhizal fungi (AMF)Colonization rateDark septate endophyte (DSE)Endophytic fungi (EF)Fungal community compositionMedicinal plant

Identifiers

PMID40859138
PMCPMC12379508

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.