Evidence map›Paper›PMID 40858884›Full record

ArticleActa pharmacologica Sinica2026

AI-enhanced virtual screening approach to hit identification for GluN1/GluN3A NMDA receptor.

Yue-Shan Ji, Yue Zeng, Shao-Fei Hu, Shu-Wang Li, Bei-Chen Zhang, Chang Liu, Hao-Chen Wu, An-Yang Wang, Zhao-Bing Gao, Yue Kong

Abstract read
In one paragraph

Article in Acta pharmacologica Sinica, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Yue-Shan Ji *Lepu Medical Technology (Beijing) Co., Ltd, Beijing, 102200, China.
Yue Zeng *State Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China.
Shao-Fei Hu *Lepu Medical Technology (Beijing) Co., Ltd, Beijing, 102200, China.
Shu-Wang LiLepu Medical Technology (Beijing) Co., Ltd, Beijing, 102200, China.
Bei-Chen ZhangLepu Medical Technology (Beijing) Co., Ltd, Beijing, 102200, China.
Chang LiuLepu Medical Technology (Beijing) Co., Ltd, Beijing, 102200, China.
Hao-Chen WuState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China.
An-Yang WangState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China.
Zhao-Bing GaoState Key Laboratory of Drug Research, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, Shanghai, 201203, China. zbgao@simm.ac.cn.
Yue KongLepu Medical Technology (Beijing) Co., Ltd, Beijing, 102200, China. yue_kong@lepumedical.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

N-methyl-D-aspartate receptors (NMDARs) are calcium-permeable ionotropic glutamate receptors broadly expressed throughout the central nervous system, where they play crucial roles in neuronal development and synaptic plasticity. Among the various subtypes, the GluN1/GluN3A receptor represents a unique glycine-gated NMDAR with notably low calcium permeability. Despite its distinctive properties, GluN1/GluN3A remains understudied, particularly with respect to pharmacological tools development. This scarcity poses challenges for deeper investigation into its physiological functions and therapeutic relevance. In this study, we employed a hybrid virtual screening (VS) pipeline that integrates ligand-based and structure-based approaches for the efficient and precise identification of small-molecule candidates targeting GluN1/GluN3A. A large compound library comprising 18 million molecules was screened using an AI-enhanced multi-stage method. The initial phase utilized shape similarity ranking via ROCS-BART, followed by refinement with a graph neural network (GNN)-based drug-target interaction model to enhance docking accuracy. Functional validation using calcium flux (FDSS/μCell) identified two compounds with IC

Indexed as

Artificial IntelligenceReceptors, N-Methyl-D-AspartateSmall Molecule LibrariesDrug Evaluation, PreclinicalHEK293 CellsHumansLigandsMolecular Docking SimulationLigandsReceptors, N-Methyl-D-AspartateSmall Molecule Librariesbidirectional and auto-regressive transformers (BART)GluN1/GluN3AN-methyl-D-aspartate receptors (NMDARs)rapid overlay of chemical structures (ROCS)shape screeningvirtual screening

Identifiers

PMID40858884
PMCPMC12765011

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.