Evidence map›Paper›PMID 40858661›Full record

ArticleScientific reports2025

Environmental exposure to perfluorooctane sulfonate and its role in esophageal cancer progression: a comprehensive bioinformatics and experimental study.

Fangyi Liu, Yansong Lin, Lixuan Liu, Yinli Zheng, Jingping Yun

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Fangyi LiuState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, People's Republic of China.
Yansong LinState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, People's Republic of China.
Lixuan LiuState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, People's Republic of China.
Yinli ZhengState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, People's Republic of China.
Jingping YunState Key Laboratory of Oncology in South China, Guangdong Provincial Clinical Research Center for Cancer, Sun Yat-Sen University Cancer Center, Guangzhou, 510060, People's Republic of China. yunjp02412@aliyun.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Esophageal cancer (ESCA) is a significant malignancy with rising global incidence rates and considerable impacts on patient survival and quality of life. Current diagnostic and therapeutic strategies face limitations, necessitating research into its underlying mechanisms and potential biomarkers for early diagnosis. This study aims to investigate the role of perfluorooctane sulfonate (PFOS), an environmental toxicant, in the development of ESCA through a comprehensive bioinformatics approach. Using the TCGA-ESCA dataset, we identified differentially expressed genes (DEGs) and intersected them with PFOS-related toxicity targets predicted via Comparative Toxicogenomics Database (CTD) and SuperPred. Machine learning (Random Forest, XGBoost, LASSO, SVM) were applied to prioritize core targets. Survival analysis, in vitro qPCR (ESO-26/FLO-1 cells), and molecular docking were performed. Immune infiltration and pathway activity (GSVA) were assessed. We identified 98 PFOS-related DEGs in ESCA, enriched in hypoxia response, epithelial migration, and cancer-associated pathways (e.g., AGE-RAGE, PI3K-Akt). Machine learning highlighted three core targets: PLAU, TOP2A, and BAX. High expression of these genes correlated with poor survival (PLAU, p = 0.047) and was upregulated in ESCA tissues. PFOS exposure significantly elevated their expression in esophageal cancer cells. Molecular docking revealed strong binding affinities between PFOS and core targets. GSVA linked PLAU/TOP2A/BAX to oncogenic pathways (angiogenesis, DNA repair), while immune analysis showed PLAU's association with stromal infiltration and TOP2A's negative correlation with CD8 + T cells. PFOS exacerbates ESCA by dysregulating PLAU, TOP2A, and BAX, which drive tumor progression via immune modulation, genomic instability, and oncogenic signaling. These targets may serve as biomarkers and therapeutic vulnerabilities for PFOS-associated ESCA, underscoring the need for environmental regulation and targeted therapies.

Indexed as

Alkanesulfonic AcidsEnvironmental ExposureEsophageal NeoplasmsFluorocarbonsCell Line, TumorComputational BiologyDisease ProgressionGene Expression Regulation, NeoplasticHumansMolecular Docking SimulationAlkanesulfonic AcidsFluorocarbonsperfluorooctane sulfonic acidEsophageal cancerImmune infiltrationMachine learningMolecular dockingMolecular dynamicsPFOSToxicity targets

Identifiers

PMID40858661
PMCPMC12381176

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.