Evidence map›Paper›PMID 40857816›Full record

ArticleComputers in biology and medicine2025

OpenSpindleNet: An open-source deep learning network for reliable sleep spindle detection in scalp and intracranial EEG.

Michal Sejak, Filip Mivalt, Vladimir Sladky, Vit Vsiansky, Diego Z Carvalho, Erik K St. Louis, Gregory A Worrell, Vaclav Kremen

Abstract read
In one paragraph

Article in Computers in biology and medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Michal SejakFaculty of Applied Sciences, University of West Bohemia, Plzen, Czech Republic; Czech Institute of Informatics, Robotics, and Cybernetics, Czech Technical University in Prague, Prague, Czech Republic. Electronic address: sejakm@ntis.zcu.cz.
Filip MivaltDepartment of Neurology, Mayo Clinic, Rochester, MN, USA.
Vladimir SladkyDepartment of Neurology, Mayo Clinic, Rochester, MN, USA; Czech Institute of Informatics, Robotics, and Cybernetics, Czech Technical University in Prague, Prague, Czech Republic; Faculty of Biomedical Engineering, Czech Technical University in Prague, Kladno, Czech Republic.
Vit VsianskyInternational Clinical Research Center and Neurology Department, St Anne's Hospital, Brno, Czech Republic.
Diego Z CarvalhoCenter for Sleep Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Mayo Clinic, Rochester, MN, USA.
Erik K St. LouisDepartment of Neurology, Mayo Clinic, Rochester, MN, USA; Center for Sleep Medicine, Division of Pulmonary and Critical Care Medicine, Department of Medicine, Mayo Clinic, Rochester, MN, USA.
Gregory A WorrellDepartment of Neurology, Mayo Clinic, Rochester, MN, USA; Department of Physiology and Biomedical Engineering, Mayo Clinic, Rochester, MN, USA.
Vaclav KremenDepartment of Neurology, Mayo Clinic, Rochester, MN, USA; Czech Institute of Informatics, Robotics, and Cybernetics, Czech Technical University in Prague, Prague, Czech Republic. Electronic address: Kremen.Vaclav@mayo.edu.

Funding

Reliable Seizure Prediction Using Physiological Signals and Machine LearningR01NS092882 · NINDS · MAYO CLINIC ROCHESTER · PI Gregory A Worrell · 2015 to 2026
$5.7M
Neurophysiologically Based Brain State Tracking & Modulation in Focal EpilepsyUH2NS095495 · NINDS · MAYO CLINIC ROCHESTER · PI WORRELL, GREGORY A · 2015 to 2018
$4.2M
Neurophysiologically Based Brain State Tracking & Modulation in Focal EpilepsyUH3NS095495 · NINDS · MAYO CLINIC ROCHESTER · PI WORRELL, GREGORY A · 2019 to 2021
$2.8M
Optimizing Pharmacotherapy with Noninvasive Wearable Sensors and Subscalp EEGUH3NS123066 · NINDS · MAYO CLINIC ROCHESTER · PI Benjamin H Brinkmann, Gregory A Worrell · 2025 to 2026
$1.4M
NINDS NIH HHS R01 NS092882NINDS NIH HHS UH2 NS095495NINDS NIH HHS UH3 NS095495NINDS NIH HHS UH3 NS123066
6 · The paper itself

Abstract

Sleep spindles, an oscillatory brain activity occurring during light non-rapid eye movement (NREM) sleep, are important for memory consolidation and cognitive functions. Accurate detection is important for understanding the role of spindles in sleep state physiology and brain health and for better understanding sleep and neurological disorders. However, manual spindle labeling of electroencephalography (EEG) data is time-consuming and impractical for most clinical and research settings and intracranial EEG (iEEG) presents additional challenges for spindle identification due to its unique signal characteristics and recording environment. This study introduces a novel, precise, and automatic spindle detection method for iEEG using a dual-head architecture to enhance performance, robustness, and ease of use. Our approach achieves a detection F1 score of 0.67 on a challenging iEEG dataset and 0.69 on the publicly available scalp EEG DREAMS dataset. Compared to existing methods such as SUMO, A7, and YASA, our model demonstrates superior performance in detecting, segmenting, and characterizing sleep spindles. This model contributes to open science and advances automated sleep spindle classification in iEEG. This will advance the development of more precise diagnostic and research tools and facilitate a deeper understanding of the role of sleep spindles in cognitive processes and neurological health.

Indexed as

BrainDeep LearningElectrocorticographyElectroencephalographySignal Processing, Computer-AssistedSleepSleep StagesHumansScalpDual-head architectureIntracranial EEG (iEEG)Machine LearningSignal segmentationSleep spindle detection

Identifiers

PMID40857816
PMCPMC12499932

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.