Evidence map›Paper›PMID 40855189›Full record

ArticleCommunications chemistry2025

Enzyme-mediated aminoglycoside resistance without target mimicry.

Mark Hemmings, Michał Zieliński, Tolou Golkar, Jonathan Blanchet, Angelos Pistofidis, Kim Munro, T Martin Schmeing, D Scott Bohle, Albert M Berghuis

Abstract read
In one paragraph

Article in Communications chemistry, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Frontiers in bioinformatics · 2026
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Mark HemmingsDepartment of Biochemistry, McGill University, Montréal, QC, Canada.ORCID http://orcid.org/0009-0009-2849-4894
Michał ZielińskiDepartment of Biochemistry, McGill University, Montréal, QC, Canada.
Tolou GolkarDepartment of Biochemistry, McGill University, Montréal, QC, Canada.
Jonathan BlanchetDepartment of Biochemistry, McGill University, Montréal, QC, Canada.
Angelos PistofidisDepartment of Biochemistry, McGill University, Montréal, QC, Canada.
Kim MunroCentre de Recherche en Biologie Structurale, McGill University, Montréal, QC, Canada.
T Martin SchmeingDepartment of Biochemistry, McGill University, Montréal, QC, Canada.ORCID http://orcid.org/0000-0002-8061-0436
D Scott BohleDepartment of Chemistry, McGill University, Montréal, QC, Canada.
Albert M BerghuisDepartment of Biochemistry, McGill University, Montréal, QC, Canada. albert.berghuis@mcgill.ca.ORCID http://orcid.org/0000-0002-2663-025X

Funding

User Training and OutreachP30GM124169 · NIGMS · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI PAUL David ADAMS, Gregory L Hura · 2017 to 2026
$28.6M
Fonds de Recherche du Québec - Santé (Fonds de la recherche en sante du Quebec) #288558Gouvernement du Canada | Canadian Institutes of Health Research (Instituts de Recherche en Santé du Canada) PJT-162365Gouvernement du Canada | Canadian Institutes of Health Research (Instituts de Recherche en Santé du Canada) PJT-178084NIGMS NIH HHS P30 GM124169U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) P30 GM124169-01
6 · The paper itself

Abstract

The primary mode of resistance to aminoglycoside antibiotics is through chemical modification catalyzed by aminoglycoside-modifying enzymes. Numerous structural studies of these enzymes have invariably shown that they bind aminoglycosides in the same lowest-energy conformation as the intended target for these antibiotics, the A site of the bacterial ribosome. Presumably, the binding mode mimicry enables these enzymes to compete successfully with the target, thus conferring effective resistance. Here we present the first structural and functional studies of two aminoglycoside-modifying enzymes that do not use target mimicry, AAC(3)-Ia and AAC(3)-XIa. X-ray diffraction studies reveal that these enzymes bind aminoglycoside antibiotics in a conformation where the central 2-deoxystreptamine ring is in boat conformation. The effect of this non-canonical binding mode on the enzymes' ability to modify antibiotics is assessed in silico and in vitro, and its impact for conferring resistance is assessed in vivo. Overall, the results show that target mimicry, while advantageous, is not an essential strategy for aminoglycoside-modifying enzymes to be effective in conferring resistance.

Identifiers

PMID40855189
PMCPMC12378234

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.