Evidence map›Paper›PMID 40849369›Full record

ArticleScientific reports2025

Identification and analysis of the endoplasmic reticulum stress hub genes in sepsis-associated ARDS.

Ling Gao, Tingting Liu, Xiaoyan Li

Abstract read
In one paragraph

Article in Scientific reports, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Divergent T Cell Phenotypes Define Pediatric Crohn's Disease and Ulcerative Colitis.medRxiv : the preprint server for health sciences · 2025
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ling GaoDepartment of Respiratory and Critical Care Medicine, Third Hospital of Shanxi Medical University Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital, Taiyuan, 030032, Shanxi Province, China.
Tingting LiuDepartment of Respiratory and Critical Care Medicine, Third Hospital of Shanxi Medical University Shanxi Bethune Hospital, Shanxi Academy of Medical Sciences, Tongji Shanxi Hospital, Taiyuan, 030032, Shanxi Province, China.
Xiaoyan LiDepartment of Pulmonary and Critical Care Medicine, Shanghai Pudong New Area Zhoupu Hospital, Shanghai University of Medicine & Health Sciences Affiliated Zhoupu Hospital, Shanghai, 201318, China. xy740922@163.com.

Funding

the Shanxi Province Overseas Students Science and Technology Activities Selection Funding Project 20200030
6 · The paper itself

Abstract

Acute respiratory distress syndrome (ARDS) is one of the most common and serious complications in the development of sepsis. Endoplasmic reticulum stress (ERS) plays an important role in the pathophysiologic process of sepsis-associated ARDS. The aim of this study was to identify and analyze hub genes related to ERS in sepsis-associated ARDS using bioinformatics and machine learning algorithms, which may serve as diagnostic markers and therapeutic targets. Based on the GSE32707 dataset from the GEO database, differentially expressed genes (DEGs) between patients with sepsis-associated acute respiratory distress syndrome (ARDS) and healthy controls were identified. A comprehensive evaluation was performed by integrating functional enrichment analysis, immune cell infiltration analysis, and weighted gene co-expression network analysis (WGCNA). By intersecting DEGs, key WGCNA module genes, and ERS-related genes(ERGs), ERS-associated differential genes in sepsis-related ARDS were obtained. Subsequently, three machine learning algorithms-least absolute shrinkage and selection operator (LASSO), random forest (RF), and support vector machine (SVM)-were used to further screen for hub ERS hub genes. The diagnostic value of these hub genes was assessed using receiver operating characteristic (ROC) curve analysis. Finally, their expression levels were validated in clinical samples using RT-qPCR. A total of 438 DEGs and five hub genes-STAT3, HSPB1, YWHAQ, LCN2, and SGK1-were identified.Diagnostic performance analysis demonstrated that all five genes had favorable discriminatory power, indicating their potential clinical utility.Further validation in clinical samples confirmed the reliability of the bioinformatics analysis. RT-qPCR results showed that STAT3 was significantly upregulated, while YWHAQ was significantly downregulated in sepsis-associated ARDS samples compared to healthy controls, with both differences reaching statistical significance. In conclusion, STAT3 and YWHAQ, as ERS-related key genes, not only play pivotal roles in sepsis-associated ARDS but also hold promise as diagnostic biomarkers and potential therapeutic targets.

Indexed as

Endoplasmic Reticulum StressRespiratory Distress SyndromeSepsisComputational BiologyDatabases, GeneticGene Expression ProfilingGene Expression RegulationGene Regulatory NetworksHumansMachine LearningROC CurveBioinformaticsEndoplasmic reticulum stressMachine learningSepsis-associated ARDS

Identifiers

PMID40849369
PMCPMC12375051

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.