Evidence map›Paper›PMID 40847387›Full record

ArticleBMC microbiology2025

Molecular epidemiology and genomic features of Bordetella pertussis in Tianjin, China, 2023.

Xiaohui Lu, Wen Li, Xuan Chen, Wei Zhang, Aiping Yu, Guangwen Liu, Baolu Zheng, Xin Gao, Yamin Liu, Xiaoyan Li

Abstract read
In one paragraph

Article in BMC microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Xiaohui LuTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Wen LiTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Xuan ChenTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Wei ZhangTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Aiping YuTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Guangwen LiuTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Baolu ZhengTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Xin GaoTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China.
Yamin LiuTianjin Second People's Hospital, Tianjin, China.
Xiaoyan LiTianjin Centers for Disease Control and Prevention, No. 6 Huayue Road, HeDong District, Tianjin, 300011, Tianjin, China. xiaoyanli1291@163.com.ORCID 0000-0001-9289-685X

Funding

Key Project of Tianjin Municipal Health Commission TJWJ2022ZD010
6 · The paper itself

Abstract

backgroundPertussis, a highly contagious respiratory disease caused by Bordetella pertussis (BP), poses challenges due to genomic variation that may contribute to its persistence in vaccinated populations and the development of antimicrobial resistance.

methodsIn this study, we characterized 27 BP isolates collected from Tianjin, China in 2023, using whole-genome sequencing and multilocus genotyping (MGT) to explore their genomic diversity. For comparative analysis, we selected 165 international BP genomes to examine the genomic diversity and evolutionary traits of Tianjin strains within a global context.

resultsThe results revealed that all 27 isolates belonged to ST2 (100.0%), with no distinct phylogenetic clustering observed. Furthermore, phylogenetic analysis integrating 165 global BP genomes indicated that the Tianjin strains exhibited high genomic homogeneity with globally circulating strains. Specifically, 16 isolates (59.3%) carried the virulence genotype ptxA-1/ptxC-4/ptxP-3/prn-150(truncated)/fim2-1/fim3-1/fhaB-1, while 11 isolates (40.7%) carried the genotype ptxA-1/ptxC-4/ptxP-3/prn150/fim2-1/fim3-1/fhaB-1. Additionally, all 27 isolates exhibited complete resistance to erythromycin, azithromycin, clarithromycin, and clindamycin, whereas 18.5% of them were resistant to levofloxacin.

conclusionsThis study elucidates the phylogenetic, genomic characteristics, and drug sensitivity profiles of BP strains isolated in Tianjin, China, in 2023, providing valuable insights into BP persistence in vaccinated populations.

Indexed as

Bordetella pertussisGenome, BacterialWhooping CoughAnti-Bacterial AgentsChild, PreschoolChinaFemaleGenetic VariationGenotypeHumansInfantMaleMicrobial Sensitivity TestsMolecular EpidemiologyMultilocus Sequence TypingPhylogenyAnti-Bacterial AgentsAntimicrobial resistanceBordetella pertussisMolecular characteristicsWhole-genome sequencing

Identifiers

PMID40847387
PMCPMC12374303

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.