Evidence map›Paper›PMID 40844737›Full record

ArticleJournal of neurology2025

Whole genome sequencing analysis in primary lateral sclerosis (PLS) patients reveals mutations in neurological diseases-causing genes.

Arianna Manini, Alberto Brusati, Maurizio Grassano, Giulia Scacciatella, Silvia Peverelli, Jacopo Spagliardi, Viviana Pensato, Alberto Doretti, Rosario Vasta, Umberto Manera and 17 more

Abstract read
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In one paragraph

Article in Journal of neurology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors.

Arianna Manini *Department of Pathophysiology and Transplantation, "Dino Ferrari" Center, Università Degli Studi Di Milano, Milan, Italy.ORCID http://orcid.org/0000-0003-3352-5228
Alberto Brusati *Department of Neurology, University of Massachusetts Chan Medical School, Worcester, MA, 01605, USA.
Maurizio GrassanoDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Giulia ScacciatellaNeurology Residency Program, Università Degli Studi Di Milano, Milan, Italy.
Silvia PeverelliDepartment of Neurology-Laboratory of Neuroscience, IRCCS, Istituto Auxologico Italiano, Milan, Italy.
Jacopo SpagliardiNeurology Residency Program, Università Degli Studi Di Milano, Milan, Italy.
Viviana PensatoUnit of Medical Genetics and Neurogenetics, Fondazione IRCCS Istituto Neurologico Carlo Besta, 20133, Milan, Italy.
Alberto DorettiDepartment of Neurology-Laboratory of Neuroscience, IRCCS, Istituto Auxologico Italiano, Milan, Italy.
Rosario VastaDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Umberto ManeraDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Antonio CanosaDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Maura BrunettiDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Davide GentiliniDepartment of Brain and Behavioral Sciences, Università Degli Studi Di Pavia, Pavia, Italy.
Stefano MessinaDepartment of Neurology-Laboratory of Neuroscience, IRCCS, Istituto Auxologico Italiano, Milan, Italy.
Federico VerdeDepartment of Neurology-Laboratory of Neuroscience, IRCCS, Istituto Auxologico Italiano, Milan, Italy.
Cristina MogliaDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Claudia MorelliDepartment of Neurology-Laboratory of Neuroscience, IRCCS, Istituto Auxologico Italiano, Milan, Italy.
Eleonora Dalla BellaThird Neurology Unit and Motor Neuron Disease Centre, Fondazione IRCCS Istituto Neurologico Carlo Besta, Via Luigi Celoria 11, 20133, Milan, Italy.
Pamela J KeagleDepartment of Neurology, University of Massachusetts Chan Medical School, Worcester, MA, 01605, USA.
John E LandersDepartment of Neurology, University of Massachusetts Chan Medical School, Worcester, MA, 01605, USA.
Cinzia GelleraUnit of Medical Genetics and Neurogenetics, Fondazione IRCCS Istituto Neurologico Carlo Besta, 20133, Milan, Italy.
Giuseppe Lauria PinterThird Neurology Unit and Motor Neuron Disease Centre, Fondazione IRCCS Istituto Neurologico Carlo Besta, Via Luigi Celoria 11, 20133, Milan, Italy.
Adriano ChiòDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Antonia RattiDepartment of Neurology-Laboratory of Neuroscience, IRCCS, Istituto Auxologico Italiano, Milan, Italy.
Andrea CalvoDepartment of Neuroscience, Rita Levi Montalcini, University of Turin, Turin, Italy.
Vincenzo Silani *Department of Pathophysiology and Transplantation, "Dino Ferrari" Center, Università Degli Studi Di Milano, Milan, Italy.ORCID http://orcid.org/0000-0002-7698-3854
Nicola Ticozzi *Department of Pathophysiology and Transplantation, "Dino Ferrari" Center, Università Degli Studi Di Milano, Milan, Italy. n.ticozzi@auxologico.it.ORCID http://orcid.org/0000-0001-5963-7426

Funding

Ministero della Salute RF-2018-12367768Ministero della Salute RF-2021-12374238
6 · The paper itself

Abstract

backgroundPrimary Lateral Sclerosis (PLS) is a rare, adult-onset neurodegenerative disease that predominantly affects upper motor neurons. Despite being considered mostly sporadic, familial cases and rare genetic variants in genes associated with amyotrophic lateral sclerosis, hereditary spastic paraplegia and other neurological disorders have been reported in some PLS cases. Due to its rare prevalence among general population, large genetic studies of PLS are lacking.

methodsFifty patients diagnosed with PLS based on consensus criteria were enrolled between 2013 and 2022 for comprehensive phenotypic and genotypic analysis using whole genome sequencing. We analyzed rare single nucleotide variants (SNVs), deemed pathogenic, likely pathogenic or of uncertain significance (VUS) based on the American College of Medical Genetics and Genomics criteria, and repeat expansions (REs) exceeding the pathogenic threshold, in 290 genes involved in neurological disorders.

resultsWe identified mutations in 7 patients (13.7%), specifically SNVs in CAPN1 (Spastic paraplegia 76), TBK1 (amyotrophic lateral sclerosis/frontotemporal dementia, ALS4/FTD), LITAF (Charcot-Marie-Tooth disease 1C), POLG (chronic progressive external ophthalmoplegia), APP (Alzheimer's disease) and OPTN (ALS12 ± FTD), and one RE in ATXN8OS (spinocerebellar ataxia 8). Additionally, two VUS were found in ANTXR2, a candidate gene for PLS recently identified via truncating variant collapsing analysis, but none of them was loss-of-function (one synonymous and one in-frame insertion).

conclusionsOur study demonstrates a notable genetic intersection between PLS and various neurological disorders, including motor neuron diseases, neuropathies, mitochondrial disorders, ataxias, and dementias. These findings underscore the relevance of further investigation in larger cohorts to fully elucidate PLS genetic architecture and highlight the need to reconsider the role of genetic testing in its diagnostic criteria.

Indexed as

Motor Neuron DiseaseMutationAdultAgedFemaleHumansMaleMiddle AgedWhole Genome SequencingAtaxiaHereditaryMitochondrial diseasesMotor neuron diseaseNeurodegenerative diseasesPeripheral nervous system diseasesPrimary lateral sclerosisSequence analysisSpastic paraplegiaTandem repeat sequencesWhole genome sequencing

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