Evidence map›Paper›PMID 40843475›Full record

ArticleSoft matter2025

Modelling transcriptional silencing and its coupling to 3D genome organisation.

M Semeraro, G Negro, D Marenduzzo, G Forte

Abstract read
In one paragraph

Article in Soft matter, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

M SemeraroDipartimento Interateneo di Fisica, Università degli Studi di Bari and INFN, Sezione di Bari, via Amendola 173, Bari I-70126, Italy.ORCID http://orcid.org/0000-0001-8273-4232
G NegroSUPA School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, UK. giuseppe.negro@ed.ac.uk.ORCID http://orcid.org/0000-0003-1755-7051
D MarenduzzoSUPA School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, UK. giuseppe.negro@ed.ac.uk.ORCID http://orcid.org/0000-0003-3974-4915
G ForteSUPA School of Physics and Astronomy, University of Edinburgh, Peter Guthrie Tait Road, Edinburgh EH9 3FD, UK. giuseppe.negro@ed.ac.uk.

Funding

Wellcome Trust
6 · The paper itself

Abstract

Timely up- or down-regulation of gene expression is crucial for cellular differentiation and function. While gene upregulation

Indexed as

ChromatinGene SilencingGenomeModels, GeneticTranscription, GeneticTranscription FactorsChromatinTranscription Factors

Identifiers

PMID40843475
PMCPMC12371520

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.