Evidence map›Paper›PMID 40841380›Full record

ArticleNature communications2025

Noncanonical terpene cyclases for the biosynthesis of diterpenoids regulating chlamydospore formation in plant-associated Trichoderma.

Min-Jie Yang, De-Sen Li, Hua-Qin Deng, Wen-Yuan Li, Xin-Yu Zheng, Jonathan Gershenzon, Xue-Mei Niu, Yan Liu, Sheng-Hong Li

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Min-Jie YangState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China.
De-Sen LiState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China.
Hua-Qin DengState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China.
Wen-Yuan LiState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China.
Xin-Yu ZhengState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China.
Jonathan GershenzonDepartment of Biochemistry, Max Planck Institute for Chemical Ecology, Hans-Knoell-Strasse 8, Jena, 07745, Germany.ORCID http://orcid.org/0000-0002-1812-1551
Xue-Mei NiuSchool of Life Sciences, State Key Laboratory for Conservation and Utilization of Bio-Resources & Key Laboratory for Microbial Resources of the Ministry of Education, Yunnan University, Kunming, 650091, P. R. China.
Yan LiuState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China. liuyan@cdutcm.edu.cn.
Sheng-Hong LiState Key Laboratory of Phytochemistry and Natural Medicines, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming, 650201, P. R. China. shli@mail.kib.ac.cn.ORCID http://orcid.org/0000-0001-5404-893X

Funding

China Postdoctoral Science Foundation 2021M703285National Natural Science Foundation of China (National Science Foundation of China) 22107103National Natural Science Foundation of China (National Science Foundation of China) 82222072National Natural Science Foundation of China (National Science Foundation of China) U23A20510
6 · The paper itself

Abstract

Terpene cyclases catalyze exquisite and complicated cyclization reactions to generate diverse terpenoid skeletons. Trichoderma fungi are important biocontrol agents, characteristic of producing complex bioactive tetracyclic diterpenoids named harzianes and trichodermanins, but their biosynthesis and biological functions have long been enigmatic. Here we identify TriDTCs, an unprecedented family of terpene cyclases in Trichoderma, responsible for cyclizing geranylgeranyl diphosphate (GGPP) into major diterpenes harzianol I and wickerol A, via heterologous expressions, gene deletion, and in vitro assays. TriDTCs represent a brand new class of terpene cyclases, lacking known motifs and diverging from all known enzymes. Mechanistically, TriDTCs likely employ a unique DxxDxxxD aspartate triad for cyclization initiation, a critical valine residue modulating product specificity, and "gatekeeper" residues for activity. Phylogenetic analysis shows TriDTCs have a narrow distribution in three fungal genera and are highly functionally specific within Trichoderma, suggesting a genus-specific acquisition and independent evolution. Functional studies implicated TriDTCs in fungal survival strategies by regulating formation of resistant propagules (chlamydospore in Trichoderma, sclerotia in Aspergillus oryzae). These findings expand the knowledge of terpene cyclase diversity and biological significance, herald a strategy to enhance Trichoderma's biocontrol efficacy, and open avenues for pharmacological investigation of these diterpenoids.

Indexed as

Alkyl and Aryl TransferasesDiterpenesFungal ProteinsSpores, FungalTrichodermaCyclizationPhylogenyPolyisoprenyl PhosphatesAlkyl and Aryl TransferasesDiterpenesFungal Proteinsgeranylgeranyl pyrophosphatePolyisoprenyl Phosphatesterpene synthase

Identifiers

PMID40841380
PMCPMC12370890

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.