Evidence map›Paper›PMID 40839434›Full record

ArticleSTAR protocols2025

Protocol for inducible expression of small non-coding RNAs using a tet-on system in Saccharomyces cerevisiae.

Regina Nostramo, Anita K Hopper

Abstract read
In one paragraph

Article in STAR protocols, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Regina NostramoDepartment of Molecular Genetics & Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA. Electronic address: nostramo.1@osu.edu.
Anita K HopperDepartment of Molecular Genetics & Center for RNA Biology, The Ohio State University, Columbus, OH 43210, USA; Comprehensive Cancer Center, The Ohio State University, Columbus, OH 43210, USA. Electronic address: hopper.64@osu.edu.

Funding

tRNA processing and nuclear-cytoplasmic dynamicsR01GM122884 · NIGMS · OHIO STATE UNIVERSITY · PI HOPPER, ANITA K · 2017 to 2024
$2.7M
NIGMS NIH HHS R01 GM122884
6 · The paper itself

Abstract

A valuable approach to understanding small non-coding RNA (sncRNA) function is to regulate their expression. However, inducible expression of sncRNAs can be challenging. Here, we present a protocol to express sncRNAs in Saccharomyces cerevisiae using a two-plasmid inducible tet-on system. We describe the steps for generating plasmids and inducing and assessing sncRNA expression. This protocol can be used to express and elucidate the function of tRNA introns and has the potential to identify functions of a wide range of sncRNAs. For complete details on the use and execution of this protocol, please refer to Nostramo et al.

Indexed as

RNA, Small UntranslatedSaccharomyces cerevisiaeGene Expression Regulation, FungalPlasmidsRNA, TransferRNA, Small UntranslatedRNA, TransferCell BiologyGeneticsModel OrganismsMolecular Biology

Identifiers

PMID40839434
PMCPMC12491163

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.