Evidence map›Paper›PMID 40838068›Full record

ArticleClinical and experimental gastroenterology2025

Characterization of Bacterial Biofilm Composition in Occluded Plastic Biliary Stents.

Victor Kalil Flumignan, Marcelo Palma Sircili, Lígia Garcia Germano, Ana Vitoria Dos Santos Souza, Nicole Fernandes Silva, Newton Kiyoshi Fukumasu, Raphaela Marques Anjos, Jose Pinhata Otoch, Everson Luiz Almeida Artifon

Abstract read
In one paragraph

Article in Clinical and experimental gastroenterology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Victor Kalil FlumignanPostgraduate Program in Anesthesiology and Surgical Sciences, Faculty of Medicine, University of São Paulo, São Paulo, Brazil.ORCID 0000-0003-3591-1237
Marcelo Palma SirciliLaboratory of Genetics, Butantan Institute and Interunit Graduate Program in Biotechnology, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-6063-7412
Lígia Garcia GermanoLaboratory of Genetics, Butantan Institute and Interunit Graduate Program in Biotechnology, University of São Paulo, São Paulo, Brazil.ORCID 0000-0001-9711-2225
Ana Vitoria Dos Santos SouzaLaboratory of Genetics, Butantan Institute and Interunit Graduate Program in Biotechnology, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-1246-5847
Nicole Fernandes SilvaLaboratory of Genetics, Butantan Institute and Interunit Graduate Program in Biotechnology, University of São Paulo, São Paulo, Brazil.ORCID 0000-0001-6616-5439
Newton Kiyoshi FukumasuInstitute for Technological Research (IPT), University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-8506-9255
Raphaela Marques AnjosFaculty of Medicine, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-7752-8095
Jose Pinhata OtochPostgraduate Program in Anesthesiology and Surgical Sciences, Faculty of Medicine, University of São Paulo, São Paulo, Brazil.ORCID 0000-0002-8293-1508
Everson Luiz Almeida ArtifonPostgraduate Program in Anesthesiology and Surgical Sciences, Faculty of Medicine, University of São Paulo, São Paulo, Brazil.ORCID 0000-0003-1900-8777

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Purpose: Plastic biliary stents are an effective treatment for biliary obstruction. Despite being resolutive and accessible, they are known to have a low patency rate, estimated at 3 to 6 months. This can be attributed to the formation of bacterial biofilm, which leads to the luminal obstruction of the stent. The aim of this study is to identify the bacterial composition of biofilms from obstructed plastic biliary stents removed through ERCP. Methods: Obstructed plastic biliary stents were retrieved from patients undergoing ERCP. The stents were fragmented into three segments of 2.0 cm each: proximal, medial, and distal. Gram staining was performed on each fragment, followed by assessment using optical microscopy. Subsequently, 4 µm cross-sections were made of each fragment, with subsequent analysis by confocal microscopy. The material from the inside of the stents was also placed in culture medium and colony-forming units were counted. Results: Optical microscopy and analysis by confocal microscopy showed a seemingly higher number of bacterial colonies in the distal portion of the stents compared to the proximal and medial regions. A greater presence of bacteria in the distal segments of the stents was confirmed, with growth reaching up to 10 Conclusion: The composition of the biofilm in biliary stents confirmed to be polymicrobial. The distal portion of the stents is likely the most frequent site of obstruction. New strategies, such as the development and improvement of plastic stents, should be considered to slow this growth and enhance permeability.

Indexed as

biliary systembiofilmERCP

Identifiers

PMID40838068
PMCPMC12361354

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.