Evidence map›Paper›PMID 40835578›Full record

ArticleThe journal of physical chemistry. B2025

CpG Methylation Protects DNA against Ionizing Radiation.

Leo Sala, Tereza Zápotocká, Jana Šáchová, Václav Olšanský, David Chvátil, François Chevalier, Violaine Vizcaino, Alain Méry, Jaroslav Kočišek

Abstract read
In one paragraph

Article in The journal of physical chemistry. B, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Leo SalaDepartment of Dynamics of Molecules and Clusters, J. Heyrovský Institute of Physical Chemistry of the CAS, Dolejškova 3, 182 23 Prague, Czech Republic.ORCID 0000-0003-1091-4386
Tereza ZápotockáDepartment of Dynamics of Molecules and Clusters, J. Heyrovský Institute of Physical Chemistry of the CAS, Dolejškova 3, 182 23 Prague, Czech Republic.
Jana ŠáchováLaboratory of Genomics and Bioinformatics, Institute of Molecular Genetics of the CAS, Vídeňská 1083, 142 20 Prague, Czech Republic.
Václav OlšanskýDepartment of Dynamics of Molecules and Clusters, J. Heyrovský Institute of Physical Chemistry of the CAS, Dolejškova 3, 182 23 Prague, Czech Republic.
David ChvátilNuclear Physics Institute of the CAS, Řež 130, 250 68 Řež, Czech Republic.
François ChevalierNormandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP, Boulevard Henri Becquerel, BP 5133, 140 70 Caen cedex 5, France.ORCID 0000-0002-8488-2324
Violaine VizcainoNormandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP, Boulevard Henri Becquerel, BP 5133, 140 70 Caen cedex 5, France.
Alain MéryNormandie Univ, ENSICAEN, UNICAEN, CEA, CNRS, CIMAP, Boulevard Henri Becquerel, BP 5133, 140 70 Caen cedex 5, France.
Jaroslav KočišekDepartment of Dynamics of Molecules and Clusters, J. Heyrovský Institute of Physical Chemistry of the CAS, Dolejškova 3, 182 23 Prague, Czech Republic.ORCID 0000-0002-6071-2144

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Methylation of DNA CpG domains in cellular DNA is a key mechanism of epigenetic regulation. Disruptions in the processes maintaining DNA methylation can lead to diseases like cancer. The radiation response of certain cancer cells may be affected by their DNA methylation levels, which may have consequences in their response to radiotherapy. In this work, we utilized DNA origami nanotechnology to examine whether DNA methylation impacts DNA response to ionizing radiation in solution before biological processes come into play. Our findings reveal that a protective effect is achieved with just a few methylated CpG adducts. Both low-LET (electron) and high-LET (carbon ion) irradiation show a reduced lesion count in methylated DNA, as indicated by qPCR results. AFM single-molecule observations using DNA origami nanoframes suggest fewer double-strand breaks in methylated DNA after carbon ion irradiation. This radioprotective effect may contribute to the differential radiation response of cellular DNA and should be considered when predicting and evaluating DNA radiation damage yields.

Indexed as

CpG IslandsDNADNA MethylationRadiation, IonizingMicroscopy, Atomic ForceDNA

Identifiers

PMID40835578
PMCPMC12415931

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.