Evidence map›Paper›PMID 40833985›Full record

ArticlePloS one2025

The role of cyclic di-GMP in biomaterial-associated infections caused by commensal Escherichia coli.

Shanshan Li, Chengwei Bi, Bingquan Xiang, Zhonghui Wang, Hui Yang, Chaojiang Fu, Lianpu Chen, Ying Chen

Abstract read
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. The Antimicrobial Peptide CRAMP-34 EradicatesAntibiotics (Basel, Switzerland) · 2026
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shanshan LiDepartment of Anesthesiology, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.ORCID https://orcid.org/0000-0002-3154-0996
Chengwei BiDepartment of Thoracic Surgery I, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.
Bingquan XiangIntensity Care Unit, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.
Zhonghui WangDepartment of Anesthesiology, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.
Hui YangDepartment of Anesthesiology, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.
Chaojiang FuDepartment of Emergency Medicine, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.
Lianpu ChenDepartment of Anesthesiology, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.
Ying ChenDepartment of Thoracic Surgery I, The Third Affiliated Hospital of Kunming Medical University, Yunnan Cancer Hospital, Peking University Cancer Hospital Yunnan, Kunming, China.ORCID https://orcid.org/0000-0003-0582-380X

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Biofilms are protective structures that bacteria use to evade the immune system and resist antibiotics, leading to complications in medical treatments, especially with implanted devices. The molecule cyclic di-GMP (c-di-GMP) is crucial for biofilm formation in Escherichia coli (E. coli). To understand its role in biomaterial-associated infections (BAIs), we created four E. coli strains with varying c-di-GMP levels: a knockout strain (ΔdgcQ), an overexpression strain (OdgcQ), a complemented strain (CΔdgcQ), and a wild-type mutant strain (WT). By employing in vitro BAI models and techniques such as crystal violet (CV) staining, XTT assay, confocal laser scanning microscopy (CLSM), and scanning electron microscopy (SEM), we observed that the ΔdgcQ strain, with low c-di-GMP levels, adhered more readily to biomaterial surfaces at the initial stage of biofilm formation, yet faced difficulties in sustaining mature biofilms. In contrast, OdgcQ and CΔdgcQ with higher c-di-GMP were able to generate more mature biofilms on biomaterial surfaces. Additionally, c-di-GMP was found to negatively regulate bacterial swimming motility and enhance the ability to cope with environmental stresses. The results also reiterate the canonical function of c-di-GMP, which is to reduce the motility of bacteria. Concurrently, gene expression analysis confirmed these findings, revealing that genes related to motility (flhC, flhD, motA, motB, ycgR), extracellular polymeric substances (EPS) synthesis (csgA, csgD, bcsA, ynfM), and stress resistance (sodA, katE, rstA, ibpA, ibpB, hdeA, hdeD, gadA, gadB) were consistently up-regulated in OdgcQ with high c-di-GMP levels. Importantly, ΔdgcQ considerably promoted the adhesion to and invasion of host cells and elicited a stronger host immune response, whereas OdgcQ impaired the ability to interact with host cells, as evidenced by decreased adhesion/invasion and inhibited release of inflammatory cytokines (IL-1β, IFN-β, IP-10, and NF-κB). Collectively, our findings shed light on the c-di-GMP signaling pathway's role in BAIs and propose that modulating this pathway could be a promising strategy for combating E. coli-induced BAIs.

Indexed as

Biocompatible MaterialsCyclic GMPEscherichia coliEscherichia coli InfectionsBacterial AdhesionBiofilmsEscherichia coli ProteinsGene Expression Regulation, BacterialHumansBiocompatible Materialsbis(3',5')-cyclic diguanylic acidCyclic GMPEscherichia coli Proteins

Identifiers

PMID40833985
PMCPMC12367115

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.