Evidence map›Paper›PMID 40833563›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2025

Lipidomic Profiling of Isolated Nuclei from Mice and Cultured Cells.

Nityanand Bolshette, Hanmei Bao, Xianlin Han, Gad Asher

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Article in Methods in molecular biology (Clifton, N.J.), 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Nityanand BolshetteDepartment of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel.
Hanmei BaoThe Sam & Ann Barshop Institute for Longevity & Aging Studies, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA.
Xianlin HanThe Sam & Ann Barshop Institute for Longevity & Aging Studies, University of Texas Health Science Center at San Antonio, San Antonio, TX, USA. HanX@uthscsa.edu.
Gad AsherDepartment of Biomolecular Sciences, Weizmann Institute of Science, Rehovot, Israel. gad.asher@weizmann.ac.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Lipidomic methodologies, in conjunction with biochemical isolation of intracellular organelles such as the nucleus, have identified a wide variety of nuclear lipid species. The nuclear lipid composition, for example, exhibits daily changes and is controlled both by the circadian clock and feeding behavior. However, the functions of many of these lipids in the nucleus remain elusive. In this chapter we describe in detail the procedure for nuclear lipidomics; from biochemical isolation of nuclei from mouse liver and cultured cells to the unbiased lipid identification and quantification using Multi-Dimensional Mass Spectrometry Shotgun Lipidomics (MDMS-SL). The approach described herein is applicable with some modifications for different tissues and various animal models, as well as a wide variety of cultured cells. It is expected to yield new insights into various aspects of nuclear lipid composition and function in the future.

Indexed as

Cell NucleusLipidomicsLipidsAnimalsCells, CulturedLipid MetabolismLiverMass SpectrometryMiceLipidsCultured cellsLipid metabolismLiverMass spectrometryMouseNucleiShotgun lipidomics

Identifiers

PMID40833563

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.