Evidence map›Paper›PMID 40833407›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2025

G-quadruplex stabilization induces DNA breaks in pericentromeric repetitive DNA sequences in B lymphocytes.

Irina Waisertreiger, Kalkidan Ayele, Mehad Hilal Elshaikh, Jacqueline H Barlow

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. G-Quadruplexes: Structural Diversity and Emerging Roles in Biomolecular Condensation.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Irina WaisertreigerDepartment of Microbiology and Molecular Genetics, University of California Davis, Davis, CA 95616.ORCID 0000-0002-8107-6263
Kalkidan AyeleDepartment of Microbiology and Molecular Genetics, University of California Davis, Davis, CA 95616.
Mehad Hilal ElshaikhDepartment of Microbiology and Molecular Genetics, University of California Davis, Davis, CA 95616.
Jacqueline H BarlowDepartment of Microbiology and Molecular Genetics, University of California Davis, Davis, CA 95616.ORCID 0000-0002-9042-6245

Funding

Staff InvestigatorsP30CA093373 · NCI · UNIVERSITY OF CALIFORNIA DAVIS · PI KC KENT LLOYD · 2002 to 2026
$84.9M
R-loop-induced DNA damage during immunoglobulin class switch recombinationR01GM134537 · NIGMS · UNIVERSITY OF CALIFORNIA AT DAVIS · PI BARLOW, JACQUELINE · 2019 to 2023
$1.8M
HHS | NIH | National Institute of General Medical Sciences (NIGMS) GM134537NCI NIH HHS P30 CA093373NIGMS NIH HHS R01 GM134537University of California Office of the president Cancer Research Coordinating Committee (UCOP CRCC) Pilot Grant C23CR5562
6 · The paper itself

Abstract

DNA secondary G-quadruplex (G4) structures can impair and even obstruct DNA replication. Defects in processing G4 structures are associated with replication stress, a common property of both B cell cancers and hyperproliferative premalignant cells. Genome instability arising from replication stress is a hallmark of cancer and strongly contributes to the chromosome rearrangements in B cell cancers. Here, we define the impact of G4-stabilizing ligands on generating genome instability in primary and malignant B cells. Treatment with the G4-stabilizing compound pyridostatin (PDS) causes breaks and chromosome rearrangements at ribosomal DNA and pericentromeric major satellite regions in both mouse primary B cell culture and CH12 lymphoma cells. PDS also causes extensive pericentromeric DNA damage in immortalized human B cell lines. Remarkably, PDS causes high level of tetraploid metaphase cells correlated with high level of dicentric chromosomes specifically in primary but not in CH12 B cells. Unlike primary B cells, CH12 cells undergo checkpoint activation and strong G2/M arrest in response to PDS treatment thus preventing tetraploid appearance. Altogether, these results highlight the difference between primary and malignant B cells in response to PDS, revealing the therapeutic potential of G4-stabilizing drugs to selectively suppress tumor cell growth and proliferation.

Indexed as

B-LymphocytesCentromereDNA BreaksG-QuadruplexesRepetitive Sequences, Nucleic AcidAminoquinolinesAnimalsCell Line, TumorDNA ReplicationDNA, RibosomalGenomic InstabilityHumansMicePicolinic AcidsAminoquinolinesDNA, RibosomalPicolinic AcidspyridostatinB lymphocytechromosome rearrangementsDNA damageG-quadruplexrepetitive DNA

Identifiers

PMID40833407
PMCPMC12403082

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.