Evidence map›Paper›PMID 40833278›Full record

ArticleJournal of chemical information and modeling2025

A Benchmark Set of Bioactive Molecules for Diversity Analysis of Compound Libraries and Combinatorial Chemical Spaces.

Alexander Neumann, Raphael Klein

Abstract read
In one paragraph

Article in Journal of chemical information and modeling, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Strategies for Identifying Molecules of Interest in Large Chemical Spaces.Journal of chemical information and modeling · 2026
    Article
  2. Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Alexander NeumannBioSolveIT GmbH, Sankt Augustin 53757, Germany.ORCID 0000-0002-1446-4389
Raphael KleinBioSolveIT GmbH, Sankt Augustin 53757, Germany.ORCID 0000-0002-5087-8730

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sources for commercially available compounds have been experiencing continuous growth for several years, reaching their peak in billion- to trillion-sized combinatorial Chemical Spaces. To assess the quality of a compound collection to provide relevant chemistry, a benchmark set of pharmaceutically relevant structures is required that enables an unbiased comparison. For this purpose, the ChEMBL database was mined for molecules displaying biological activity, and three benchmark sets of successive orders of magnitude were created by systematic filtering and processing: Set

Indexed as

Combinatorial Chemistry TechniquesSmall Molecule LibrariesBenchmarkingDatabases, ChemicalSmall Molecule Libraries

Identifiers

PMID40833278
PMCPMC12421692

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.