Evidence map›Paper›PMID 40830366›Full record

ArticleNature communications2025

Insights into type IX secretion from PorKN cogwheel structure bound to PorG and attachment complexes.

Dhana G Gorasia, Eric Hanssen, Manasi Mudaliyar, Craig J Morton, Sepideh Valimehr, Christine Seers, Lianyi Zhang, Matthew T Doyle, Debnath Ghosal, Paul D Veith and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Deciphering the different Mycobacterium avium complex infections of HIV and non-HIV patients by bacterial GWAS and immune cells flow cytometry.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2026
    Article
  2. Article
  3. Advances in the type IX secretion system: an exploration focusing onCurrent research in microbial sciences · 2025
    Review
  4. TheJournal of oral microbiology · 2025
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Dhana G Gorasia *Oral Health Cooperative Research Centre, Melbourne Dental School, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia. gorasiad@unimelb.edu.au.ORCID http://orcid.org/0000-0002-6223-5513
Eric Hanssen *Ian Holmes Imaging Centre, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-4064-1844
Manasi MudaliyarARC Industrial Training Centre for Cryo Electron Microscopy of Membrane Proteins, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia.
Craig J MortonCSIRO Biomedical Manufacturing, Clayton, VIC, Australia.ORCID http://orcid.org/0000-0001-5452-5193
Sepideh ValimehrIan Holmes Imaging Centre, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0001-5845-8100
Christine SeersOral Health Cooperative Research Centre, Melbourne Dental School, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-7777-443X
Lianyi ZhangOral Health Cooperative Research Centre, Melbourne Dental School, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia.
Matthew T DoyleSydney Infectious Diseases Institute, The University of Sydney, Darlington, NSW, Australia.ORCID http://orcid.org/0000-0002-1876-1209
Debnath GhosalARC Industrial Training Centre for Cryo Electron Microscopy of Membrane Proteins, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia.ORCID http://orcid.org/0000-0002-2227-0330
Paul D VeithOral Health Cooperative Research Centre, Melbourne Dental School, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia. pdv@unimelb.edu.au.ORCID http://orcid.org/0000-0002-7344-1662
Eric C ReynoldsOral Health Cooperative Research Centre, Melbourne Dental School, The Bio21 Molecular Science and Biotechnology Institute, The University of Melbourne, Parkville, VIC, Australia. e.reynolds@unimelb.edu.au.ORCID http://orcid.org/0000-0002-6618-4856

Funding

Australian Government Department of Industry and Science | Australian Astronomical Observatory (AAO) 2000088
6 · The paper itself

Abstract

The Type IX Secretion System exports proteins across the outer membrane (OM) of bacteria in the Bacteroidota phylum, however, the mechanistic details remain unknown. In Porphyromonas gingivalis the core components of the multi-protein complex are the Sov translocon, Attachment Complexes (PorQ, U, V, Z), PorLM molecular motors and PorKN rings. Here, we present a ~ 3.5 Å cryo-EM structure of the periplasmic rings comprising 32-33 subunits each of PorK and PorN. Additionally, we show the presence of a critical disulfide bond between PorK and the OM protein PorG that is essential for protein secretion and demonstrate that the Attachment Complexes bind to, and are localized above, the PorKN rings. Overall, each ring resembles a cogwheel with PorN forming cog-like projections that we propose engage with the PorLM motor to drive the rotation of the PorKN cogwheel together with PorG and associated Attachment Complexes, thus providing the energy to complete protein secretion and the coordinated cell surface attachment of the secreted cargo.

Indexed as

Bacterial Outer Membrane ProteinsBacterial ProteinsBacterial Secretion SystemsPorphyromonas gingivalisCryoelectron MicroscopyModels, MolecularProtein BindingBacterial Outer Membrane ProteinsBacterial ProteinsBacterial Secretion Systems

Identifiers

PMID40830366
PMCPMC12365241

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.