Evidence map›Paper›PMID 40828514›Full record

ArticleProtein science : a publication of the Protein Society2025

Detergent-free isolation and characterization of amyloid precursor protein C99 in E. coli native lipid-nanodiscs using non-ionic polymer.

Gaurav Sharma, Bankala Krishnarjuna, Volodymyr M Hiiuk, Magdalena I Ivanova, Pavel Nagorny, Ayyalusamy Ramamoorthy

Abstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Gaurav SharmaBiophysics Program, The University of Michigan, Ann Arbor, Michigan, USA.
Bankala KrishnarjunaBiophysics Program, The University of Michigan, Ann Arbor, Michigan, USA.
Volodymyr M HiiukBiophysics Program, The University of Michigan, Ann Arbor, Michigan, USA.
Magdalena I IvanovaBiophysics Program, The University of Michigan, Ann Arbor, Michigan, USA.
Pavel NagornyDepartment of Chemistry, The University of Michigan, Ann Arbor, Michigan, USA.
Ayyalusamy RamamoorthyBiophysics Program, The University of Michigan, Ann Arbor, Michigan, USA.

Funding

Dynamics, Regulation and Function of p53 in Single CellsR35GM139572 · NIGMS · HARVARD MEDICAL SCHOOL · PI Galit Lahav · 2021 to 2026
$4.7M
New Methods and Strategies for the Synthesis and Selective Derivatization of Natural ProductsR35GM136341 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Pavel Nagorny · 2020 to 2026
$2.6M
Development of biophysical approaches to investigate high-resolution structure and dynamics of membrane proteinsR35GM139573 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Ayyalusamy Ramamoorthy · 2021 to 2026
$2.0M
Structural Investigation of Amylin Oligomers Associated to Type-2 DiabetesR01DK132214 · NIDDK · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI RAMAMOORTHY, AYYALUSAMY · 2022 to 2025
$1.4M
Orbitrap Fusion Lumos ETD with IRMPD for UM Chemistry MS Facility ExpansionS10OD021619 · OD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI HAKANSSON, KRISTINA · 2016 to 2016
$1.1M
NIDDK NIH HHS R01 DK132214NIGMS NIH HHS R35 GM136341NIGMS NIH HHS R35 GM139572NIGMS NIH HHS R35 GM139573NIH HHS R35GM136341NIH HHS R35GM139572NIH HHS RO1DK132214NIH HHS S10 OD021619NIH HHS S10OD021619
6 · The paper itself

Abstract

Alzheimer's disease (AD), a progressive neurodegenerative disorder, is characterized by cognitive decline resulting from neuronal cell death. A key contributor to AD pathology is C99, a membrane-bound β-secretase-cleaved fragment of amyloid precursor protein (APP). C99 plays a central role in generating amyloid-beta (Aβ) isomers, which are directly implicated in disease progression. Understanding its structure and lipid interactions is essential for elucidating its mechanistic role in AD and guiding therapeutic development. C99 has been studied in membrane mimetics such as micelles, bicelles, and reconstituted nanodiscs. Although reconstituted nanodiscs provide a native-like lipid-bilayer environment, the use of detergents prior to reconstitution has been reported to disrupt native folding and lipid-protein interactions. In this study, we successfully isolated and purified C99 along with its associated lipids directly from E. coli cell membranes using a non-ionic pentyl-inulin polymer, avoiding the need for detergents. The purified C99-containing pentyl-inulin nanodiscs were characterized using SDS-PAGE, Western blotting, dynamic light scattering (DLS),

Indexed as

Amyloid beta-Protein PrecursorEscherichia coliLipid BilayersNanostructuresHumansAmyloid beta-Protein PrecursorLipid BilayersAlzheimer's diseaseamyloid precursor protein (APP‐C99)C99 oligomerdetergent‐free purificationnanodiscnon‐ionic polymer

Identifiers

PMID40828514
PMCPMC12363408

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.