Evidence map›Paper›PMID 40828364›Full record

ArticleProtein science : a publication of the Protein Society2025

Human IgE monoclonal antibodies define two unusual epitopes trapping dog allergen Can f 1 in different conformations.

Kriti Khatri, Alyssa Ball, Jill Glesner, Christina Linn, Lisa D Vailes, Sabina Wünschmann, Scott A Gabel, Jian Zhang, R Stokes Peebles, Tomasz Borowski and 5 more

Erratum issuedAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Kriti KhatriDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
Alyssa BallInBio, Charlottesville, Virginia, USA.
Jill GlesnerInBio, Charlottesville, Virginia, USA.
Christina LinnDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.
Lisa D VailesInBio, Charlottesville, Virginia, USA.
Sabina WünschmannInBio, Charlottesville, Virginia, USA.
Scott A GabelNational Institute of Environmental Health Sciences, Research Triangle Park, North Carolina, USA.
Jian ZhangVanderbilt University Medical Center, Nashville, Tennessee, USA.
R Stokes PeeblesVanderbilt University Medical Center, Nashville, Tennessee, USA.
Tomasz BorowskiJerzy Haber Institute of Catalysis and Surface Chemistry, Polish Academy of Sciences, Kraków, Poland.
Geoffrey A MuellerNational Institute of Environmental Health Sciences, Research Triangle Park, North Carolina, USA.
Martin D ChapmanInBio, Charlottesville, Virginia, USA.
Scott A SmithVanderbilt University Medical Center, Nashville, Tennessee, USA.
Anna PomésInBio, Charlottesville, Virginia, USA.
Maksymilian ChruszczDepartment of Biochemistry and Molecular Biology, Michigan State University, East Lansing, Michigan, USA.ORCID 0000-0001-7521-5485

Funding

Antigenic determinants of asthma-associated allergens for design of immunotherapy.R01AI077653 · NIAID · INDOOR BIOTECHNOLOGIES · PI MARTIN D. CHAPMAN, Maksymilian Chruszcz · 2009 to 2026
$9.5M
Comprehensive antigenic mapping of the human anti-peanut IgE antibody responseR01AI155668 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SMITH, SCOTT ALAN · 2021 to 2025
$4.1M
Generation and characterization of full-length naturally occurring allergen-specific human IgE mAbsR21AI123307 · NIAID · VANDERBILT UNIVERSITY MEDICAL CENTER · PI SMITH, SCOTT ALAN · 2017 to 2018
$408k
NIAID NIH HHS R01 AI077653NIAID NIH HHS R01 AI155668NIAID NIH HHS R21 AI123307NIH HHS R01AI077653-14
6 · The paper itself

Abstract

Molecular analysis of interactions between IgE antibody and allergen allows the structural basis of IgE recognition to be defined. Human IgE (hIgE) epitopes of respiratory lipocalin allergens, including Can f 1, remain elusive due to a lack of IgE-allergen complexes. This study aims to map the structure of allergenic epitopes on Can f 1. The fragment antigen-binding (Fab) regions of Can f 1 specific human IgE monoclonal antibodies (hIgE mAb) were used to determine the structures of IgE epitopes. Epitope mutants were designed to target Can f 1 epitopes. Immunoassays and a human FcεRIα transgenic mouse model of passive anaphylaxis in vivo were used to assess the functional activity of epitope mutants. Crystal structures of natural or recombinant Can f 1 complexed with two hIgE mAb 1J11 and 12F3 Fabs, respectively, were determined. The hIgE mAb bound to two partially overlapping epitopes and recognized two different Can f 1 conformations. The hIgE mAb 12F3 showed an unusual mode of binding by protruding its heavy chain CDR3 inside the Can f 1 calyx. Epitope mutants generated based on the structural analyses displayed a 64%-89% reduction in IgE antibody binding and failed to induce passive anaphylaxis in a human FcεRIα transgenic mouse model. In summary, the structures of Can f 1-hIgE Fab complexes revealed two unique and partially overlapping epitopes on Can f 1. The modification of the identified IgE epitopes provides a pathway for the design of hypoallergens to treat dog allergies.

Indexed as

AllergensAntibodies, MonoclonalEpitopesImmunoglobulin EAnimalsDogsHumansImmunoglobulin Fab FragmentsMiceMice, TransgenicModels, Molecularallergen Can f IAllergensAntibodies, MonoclonalEpitopesImmunoglobulin EImmunoglobulin Fab FragmentsCan f 1conformational epitopedog allergenepitope mutantshuman IgE antibodyIgE/allergen complexeslipocalins

Identifiers

PMID40828364
PMCPMC12363406

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.