Evidence map›Paper›PMID 40823810›Full record

ArticleNucleic acids research2025

Peripheral heterochromatin tethering is required for chromatin-based nuclear mechanical response.

Ali Göktuğ Attar, Jarosław Paturej, Ozan S Sarıyer, Edward J Banigan, Aykut Erbaş

Abstract read
In one paragraph

Article in Nucleic acids research, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Ali Göktuğ AttarUNAM - National Nanotechnology Research Center and Institute of Materials Science & Nanotechnology, Bilkent University, 06800 Ankara, Turkey.
Jarosław PaturejInstitute of Physics, University of Silesia, 40-007 Katowice, Poland.
Ozan S SarıyerSchool of Arts and Sciences, Pîrî Reis University, Tuzla 34940, Istanbul, Turkey.ORCID 0000-0001-6064-392X
Edward J BaniganInstitute for Medical Engineering and Science and Department of Physics, Massachusetts Institute of Technology, Cambridge, MA02139, United States.ORCID 0000-0001-5478-7425
Aykut ErbaşUNAM - National Nanotechnology Research Center and Institute of Materials Science & Nanotechnology, Bilkent University, 06800 Ankara, Turkey.ORCID 0000-0003-2192-8804

Funding

Center for 3D Structure and Physics of the GenomeUM1HG011536 · NHGRI · UNIV OF MASSACHUSETTS MED SCH WORCESTER · PI DEKKER, JOB, MIRNY, LEONID A · 2020 to 2024
$11.8M
Council of Science and TechnologyEU'sMSCA 2021/43/P/ST3/01833MSCA 945339NCNNHGRI NIH HHS UM1 HG011536NIH HHS UM1HG011536
6 · The paper itself

Abstract

The cell nucleus is a mechanically responsive structure that governs how external forces affect chromosomes. Chromatin, particularly transcriptionally inactive heterochromatin, resists nuclear deformations through its mechanical response. However, chromatin also exhibits liquid-like properties, casting ambiguity on the physical mechanisms of chromatin-based nuclear elasticity. To determine how heterochromatin strengthens nuclear mechanical response, we performed polymer physics simulations of a nucleus model validated by micromechanical measurements and chromosome conformation capture data. The attachment of peripheral heterochromatin to the lamina is required to transmit forces directly to the chromatin and elicit its elastic response. Thus, increases in heterochromatin levels increase nuclear rigidity by increasing the linkages between chromatin and the lamina. Crosslinks within heterochromatin, such as HP1α proteins, can also stiffen nuclei, but only if chromatin is peripherally tethered. In contrast, heterochromatin affinity interactions that may drive liquid-liquid phase separation do not contribute to nuclear rigidity. When the nucleus is stretched, gel-like peripheral heterochromatin can bear stresses and deform, while the more fluid-like interior euchromatin is less perturbed. Thus, heterochromatin's internal structure and stiffness may regulate nuclear mechanics via peripheral attachment to the lamina, while also enabling nuclear mechanosensing of external forces and external measurement of the nucleus' internal architecture.

Indexed as

Cell NucleusChromatinHeterochromatinBiomechanical PhenomenaChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneElasticityEuchromatinNuclear LaminaChromatinChromobox Protein Homolog 5Chromosomal Proteins, Non-HistoneEuchromatinHeterochromatin

Identifiers

PMID40823810
PMCPMC12359041

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.