Evidence map›Paper›PMID 40817332›Full record

ArticleNature communications2025

Conserved nucleocytoplasmic density homeostasis drives cellular organization across eukaryotes.

Abin Biswas, Omar Muñoz, Kyoohyun Kim, Carsten Hoege, Benjamin M Lorton, Rainer Nikolay, Matthew L Kraushar, David Shechter, Jochen Guck, Vasily Zaburdaev and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Reconstitution of genome remodeling usingFrontiers in cell and developmental biology · 2026
    Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Abin Biswas *Max Planck Institute for Infection Biology, Berlin, Germany.ORCID http://orcid.org/0000-0002-0129-8561
Omar Muñoz *Max-Planck-Zentrum für Physik und Medizin, Erlangen, Germany.
Kyoohyun Kim *Max Planck Institute for the Science of Light, Erlangen, Germany.ORCID http://orcid.org/0000-0003-1808-775X
Carsten HoegeMax Planck Institute of Molecular Cell Biology & Genetics, Dresden, Germany.
Benjamin M LortonAlbert Einstein College of Medicine, Bronx, NY, USA.
Rainer NikolayMax Planck Institute for Molecular Genetics, Berlin, Germany.ORCID http://orcid.org/0000-0003-4713-2548
Matthew L KrausharMax Planck Institute for Molecular Genetics, Berlin, Germany.ORCID http://orcid.org/0000-0002-7359-0318
David ShechterAlbert Einstein College of Medicine, Bronx, NY, USA.ORCID http://orcid.org/0000-0001-9388-6004
Jochen GuckMax Planck Institute for the Science of Light, Erlangen, Germany. jochen.guck@mpl.mpg.de.ORCID http://orcid.org/0000-0002-1453-6119
Vasily ZaburdaevMax-Planck-Zentrum für Physik und Medizin, Erlangen, Germany. vasily.zaburdaev@fau.de.
Simone ReberMax Planck Institute for Infection Biology, Berlin, Germany. reber@mpiib-berlin.mpg.de.ORCID http://orcid.org/0000-0002-5287-2332

Funding

PRMT5-MEP50 Histone Arginine Methylation in Early DevelopmentR01GM108646 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI SHECHTER, DAVID · 2014 to 2022
$3.2M
Regulation of Histone Chaperone Function by GlutamylationR01GM135614 · NIGMS · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SHECHTER, DAVID · 2020 to 2023
$1.6M
Deutsche Forschungsgemeinschaft (German Research Foundation) RE 3925/1-1NIGMS NIH HHS R01 GM108646NIGMS NIH HHS R01 GM135614
6 · The paper itself

Abstract

The confinement of macromolecules has profound implications for cellular biochemistry. It generates environments with specific physical properties affecting diffusion, macromolecular crowding, and reaction rates. Yet, it remains unknown how intracellular density distributions emerge and affect cellular physiology. Here, we show that the nucleus is less dense than the cytoplasm and that living systems establish a conserved density ratio between these compartments due to a pressure balance across the nuclear envelope. Nuclear transport establishes a specific nuclear proteome that exerts a colloid osmotic pressure, which, assisted by chromatin pressure, increases nuclear volume. During C. elegans development, the nuclear-to-cytoplasmic density ratio is robustly maintained even when nuclear-to-cytoplasmic volume ratios change. We show that loss of density homeostasis correlates with altered cell functions like senescence and propose density distributions as key markers in pathophysiology. In summary, this study reveals a homeostatic coupling of macromolecular densities that drives cellular organization and function.

Indexed as

Caenorhabditis elegansCell NucleusCytoplasmHomeostasisActive Transport, Cell NucleusAnimalsCaenorhabditis elegans ProteinsNuclear EnvelopeOsmotic PressureCaenorhabditis elegans Proteins

Identifiers

PMID40817332
PMCPMC12356907

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.