Evidence map›Paper›PMID 40817100›Full record

ArticleScientific data2025

A chromosome-level genome assembly of Sarcophaga princeps Wiedemann, 1830 (Diptera: Sarcophagidae).

Liangliang Li, Yinghui Wang, Yingna Zhang, Wenxuan Huang, Shujin Li, Yu Wang

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In one paragraph

Article in Scientific data, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Liangliang LiShandong University of Political Science and Law, Jinan, 250014, Shandong, China.
Yinghui WangDepartment of Forensic Medicine, Soochow University, Suzhou, 215000, Jiangsu, China.
Yingna ZhangDepartment of Anatomy, Shihezi University School of Medicine, Shihezi, 832003, Xinjiang, China.
Wenxuan HuangShandong University of Political Science and Law, Jinan, 250014, Shandong, China.
Shujin LiHebei Key Laboratory of Forensic Medicine, Shijiazhuang, 050017, Hebei, China. shujinli@hebmu.edu.can.
Yu WangDepartment of Forensic Medicine, Soochow University, Suzhou, 215000, Jiangsu, China. yuw@suda.edu.cn.

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32070508National Natural Science Foundation of China (National Science Foundation of China) 32270545National Natural Science Foundation of China (National Science Foundation of China) 82160323National Science Foundation of China | Major Research Plan 82293650National Science Foundation of China | Major Research Plan 82293651
6 · The paper itself

Abstract

Sarcosaprophagous insects play a pivotal role in forensic entomology, particularly in estimation of the postmortem interval (PMI). Among them, Sarcophaga princeps Wiedemann, 1830 (Diptera: Sarcophagidae), demonstrates distinct ecological traits such as larviposition and the ability to colonize buried remains. Even so, it has been hard to learn more about its molecular biology since a high-quality genome assembly is missing. This research uses PacBio HiFi, Illumina and Hi-C methods to produce a chromosome-level genome assembly for S. princeps. The resulting genome spans 628.56 Mb, with a scaffold N50 of 118.89 Mb, and 99.87% of the assembled sequence (627.74 Mb) successfully anchored to seven chromosomes. BUSCO analysis indicates that the genome is 99.10% complete, with 94.4% of genes present in single copy and 4.7% duplicated. Annotation of the genome identified 14,348 protein-coding genes and found that repetitive sequences occupy 333.04 Mb of the genome. The availability of this high-resolution genomic resource will greatly improve future research on the evolution, habitats and genomics of the Sarcophagidae family.

Indexed as

Chromosomes, InsectGenome, InsectSarcophagidaeAnimalsMolecular Sequence Annotation

Identifiers

PMID40817100
PMCPMC12356888

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.