Evidence map›Paper›PMID 40815463›Full record

ArticlemSystems2025

Network controllability analysis reveals the antiviral potential of Etravirine against hepatitis E virus infection.

Shabnam Ansari, Dipanka Tanu Sarmah, Rohit Verma, Kannan Chandrasekar, Shalimar, Baibaswata Nayak, Samrat Chatterjee, Milan Surjit

Abstract read
In one paragraph

Article in mSystems, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Shabnam AnsariVirology Laboratory, Center for Virus research, therapeutics and vaccines, Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad, Haryana, India.ORCID 0009-0007-1773-2362
Dipanka Tanu SarmahComplex analysis group, Computational and Mathematical Biology Center, Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad, Haryana, India.
Rohit VermaVirology Laboratory, Center for Virus research, therapeutics and vaccines, Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad, Haryana, India.
Kannan ChandrasekarVirology Laboratory, Center for Virus research, therapeutics and vaccines, Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad, Haryana, India.
ShalimarDepartment of Gastroenterology, All India Institute of Medical Sciences, New Delhi, India.
Baibaswata NayakDepartment of Gastroenterology, All India Institute of Medical Sciences, New Delhi, India.
Samrat ChatterjeeComplex analysis group, Computational and Mathematical Biology Center, Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad, Haryana, India.ORCID 0000-0002-5010-2799
Milan SurjitVirology Laboratory, Center for Virus research, therapeutics and vaccines, Translational Health Science and Technology Institute, NCR Biotech Science Cluster, Faridabad, Haryana, India.ORCID 0000-0001-8435-3257

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis E virus (HEV) is a major cause of acute viral hepatitis in lower- and middle-income countries. HEV infection may lead to acute liver failure, chronic liver disease, and high mortality in pregnant women. Antiviral therapy is not a standard treatment for HEV patients. Computational biology tools promise to revolutionize the antiviral drug discovery. Here, we analyzed the transcriptome data of HEV-infected primary human hepatocyte cells through the connectivity map database and applied control theory on the functional network to identify antiviral targets against HEV. The above analyses predicted PKCβ, PKB/AKT, and CK1ε as potential antiviral targets against HEV. The antiviral function of PKB/AKT and CK1ε was experimentally validated by using respective biochemical inhibitors in g3 (genotype 3)-HEV replicon and Huh7 cell-based model of g3 and g1-HEV infection. Furthermore, knockdown of CK1ε showed a similar effect. These data confirmed that CK1ε is an antiviral target for HEV. At present, there are no Food and Drug Administration (FDA)-approved drugs targeting CK1ε. Etravirine is an FDA-approved non-nucleoside reverse transcriptase inhibitor drug, used for the treatment of AIDS patients. An

Indexed as

Antiviral AgentsHepatitis EHepatitis E virusPyridazinesHepatocytesHumansNitrilesPyrimidinesAntiviral AgentsetravirineNitrilesPyridazinesPyrimidinescasein kinase 1εconnectivity mapEtravirineHepatitis E virusnetwork controllabilityprotein kinase B

Identifiers

PMID40815463
PMCPMC12456023

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LicenceCC BY
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.