Evidence map›Paper›PMID 40815159›Full record

ArticleMicrobiology spectrum2025

The impact of bioinformatic choices on

Marco Marchetti, Emanuel M Fonseca, Kimberly E Hanson, Bridget Barker, Katharine S Walter

Abstract read
In one paragraph

Article in Microbiology spectrum, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Marco MarchettiEccles Institute of Human Genetics, University of Utah, Salt Lake City, Utah, USA.
Emanuel M FonsecaDivision of Epidemiology, University of Utah, Salt Lake City, Utah, USA.ORCID 0000-0002-2952-8816
Kimberly E HansonDepartment of Medicine, Division of Infectious Diseases, University of Utah School of Medicine, Salt Lake City, Utah, USA.
Bridget BarkerDepartment of Biological Sciences, Northern Arizona University, Flagstaff, Arizona, USA.ORCID 0000-0002-3439-4517
Katharine S WalterDivision of Epidemiology, University of Utah, Salt Lake City, Utah, USA.ORCID 0000-0003-0065-2204

Funding

Burroughs Wellcome Fund
6 · The paper itself

Abstract

Emerging fungal pathogens, such as

Indexed as

CoccidioidesCoccidioidomycosisComputational BiologyGenetic VariationGenome, FungalHumansPhylogenyPolymorphism, Single NucleotideCoccidioides immitisCoccidioides posadasiifungal genomicsrepetitive elementsspecies identificationvariant calling pipeline

Identifiers

PMID40815159
PMCPMC12502711

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.