Evidence map›Paper›PMID 40813989›Full record

ArticleJournal of translational medicine2025

Protein modifications by advanced glycation end products (AGEs) in human clear cell renal cell carcinoma.

Agnieszka Gęgotek, Justyna Brańska-Januszewska, Paweł Samocik, Robert Kozłowski, Mariusz Koda, Neven Zarkovic, Elżbieta Skrzydlewska, Halina Ostrowska

Abstract read
In one paragraph

Article in Journal of translational medicine, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Agnieszka GęgotekDepartment of Analytical Chemistry, Medical University of Bialystok, Mickiewicza 2D, 15-222, Bialystok, Poland. agnieszka.gegotek@umb.edu.pl.ORCID 0000-0002-5240-1346
Justyna Brańska-JanuszewskaDepartment of Biology, Medical University of Bialystok, Mickiewicza 2A, 15-222, Bialystok, Poland.
Paweł SamocikDepartment of Oncological and General Urology, The Jędrzej Śniadecki Regional Polyclinical Hospital, Skłodowskiej-Curie 25, 15-278, Bialystok, Poland.
Robert KozłowskiDepartment of Oncological and General Urology, The Jędrzej Śniadecki Regional Polyclinical Hospital, Skłodowskiej-Curie 25, 15-278, Bialystok, Poland.
Mariusz KodaDepartment of General Pathomorphology, Medical University of Bialystok, Waszyngtona 13, 15-269, Bialystok, Poland.
Neven ZarkovicDiv. Molecular Medicine Laboratory for Oxidative Stress, Ruder Boskovic Institute, Zagreb, Croatia.
Elżbieta SkrzydlewskaDepartment of Analytical Chemistry, Medical University of Bialystok, Mickiewicza 2D, 15-222, Bialystok, Poland.
Halina OstrowskaDepartment of Biology, Medical University of Bialystok, Mickiewicza 2A, 15-222, Bialystok, Poland.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe development of cancer is often associated with altered glycolytic processes, resulting in the accumulation of highly reactive dicarbonyl compounds that promote protein modifications through advanced glycation end products (AGEs). This study aimed to quantify and identify the major AGE-modified proteins in clear cell renal cell carcinoma (ccRCC).

methodsA proteomic approach (SDS-PAGE/HPLC/MS-MS) with partial validation based on 2D-SDS-PAGE-Western blot was used to identify protein modifications by AGEs in cancer tissue samples of 16 patients with ccRCC compared to respective non-tumor kidney tissues of the same patients.

resultsThe findings revealed elevated levels of carboxymethylation/carboxyethylation along with the increased formation of pyrraline, argpyrimidine, and pentosidine on cysteine, lysine, or arginine residues in tumor tissues compared to matched non-tumor kidney tissue. Albumin was identified as a target for AGE modifications in its pre-proalbumin and mature forms. Most of the AGE-modified proteins in ccRCC tissues were involved in catalytic and binding functions, regulation, transcription and transport. These proteins were distributed throughout the cell, including the nucleus, as confirmed by immunofluorescence analysis. Of note, five of ten AGE-modified glycolytic enzymes were found exclusively in ccRCC tissues.

conclusionsThis study demonstrates a distinct AGE-modified proteome in ccRCC compared to non-tumor tissue, with modifications frequently occurring within or near functional domainst. Therefore, further investigation into the mechanisms underlying AGE-protein adduct formation in renal carcinogenesis could help in understanding ccRCC development.

Indexed as

Carcinoma, Renal CellGlycation End Products, AdvancedKidney NeoplasmsProtein Processing, Post-TranslationalAgedFemaleHumansMaleMethylationMiddle AgedProteomicsTandem Mass SpectrometryGlycation End Products, AdvancedAdvanced glycation end products (AGEs)Clear cell renal cell carcinoma (ccRCC)Kidney diseaseProtein modificationProteomicsTumor

Identifiers

PMID40813989
PMCPMC12355867

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.