Evidence map›Paper›PMID 40813923›Full record

ArticleNature microbiology2025

Characterization of an amyloid-based antiphage defence system in Escherichia coli.

Léa Ibarlosa, Sonia Dheur, Corinne Sanchez, Seamoon Deb, Alexandra Granger-Farbos, Virginie Coustou, Mélanie Berbon, Aurélie Massoni-Laporte, Bénédicte Salin, Corinne Blancard and 9 more

Erratum issuedAbstract read
PubMed Publisher
In one paragraph

Article in Nature microbiology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Amyloids in bacterial antiphage defence.Nature microbiology · 2025
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors.

Léa IbarlosaIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France.
Sonia DheurIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France.
Corinne SanchezCBMN, UMR5248, IECB, Université de Bordeaux, CNRS, Bordeaux INP, Pessac, France.
Seamoon DebCBMN, UMR5248, IECB, Université de Bordeaux, CNRS, Bordeaux INP, Pessac, France.
Alexandra Granger-FarbosIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France.
Virginie CoustouIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France.
Mélanie BerbonCBMN, UMR5248, IECB, Université de Bordeaux, CNRS, Bordeaux INP, Pessac, France.
Aurélie Massoni-LaporteIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France.
Bénédicte SalinIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France.
Corinne BlancardIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France.
Claire SaragagliaCBMN, UMR5248, IECB, Université de Bordeaux, CNRS, Bordeaux INP, Pessac, France.
Xavière Menatong TeneBacteriophage Bacterium Host, Institut Pasteur, CNRS UMR 6047, Université Paris Cité, Paris, France.
Nicolas DufourBacteriophage Bacterium Host, Institut Pasteur, CNRS UMR 6047, Université Paris Cité, Paris, France.ORCID http://orcid.org/0000-0002-1359-6689
Ombeline RossierInstitute for Integrative Biology of the Cell (I2BC), Université Paris-Saclay, CEA, CNRS, Gif-sur-Yvette, France.
Birgit HabensteinCBMN, UMR5248, IECB, Université de Bordeaux, CNRS, Bordeaux INP, Pessac, France.
Laurent DebarbieuxBacteriophage Bacterium Host, Institut Pasteur, CNRS UMR 6047, Université Paris Cité, Paris, France.ORCID http://orcid.org/0000-0001-6875-5758
Brice KauffmannUAR3033 INSERM, Université de Bordeaux, CNRS, IECB, Pessac, France.ORCID http://orcid.org/0000-0002-2932-3255
Antoine LoquetCBMN, UMR5248, IECB, Université de Bordeaux, CNRS, Bordeaux INP, Pessac, France.ORCID http://orcid.org/0000-0001-7176-7813
Sven J SaupeIBGC, UMR 5095, CNRS-Université de Bordeaux, Bordeaux, France. sven.saupe@ibgc.cnrs.fr.ORCID http://orcid.org/0000-0002-6236-3128

Funding

Agence Nationale de la Recherche (French National Research Agency) 21-CE11-0007Université de Bordeaux (University of Bordeaux) Frontiers of Life
6 · The paper itself

Abstract

Amyloids are β-sheet-rich protein polymers that can cause disease but also serve functional purposes in cells. In animals and fungi, functional amyloids have a role in regulated cell death as molecular switches activating key cell death effectors. Here we describe an amyloid-based abortive infection antiphage defence system in Escherichia coli. This system leads to death of phage-infected cells and involves two proteins, Bab and Agp, which share a common amyloid motif and are encoded by adjacent genes. Following infection, Agp activates Bab through amyloid signalling. Activation of Bab then causes membrane alterations and cell death. We determined the structure of the cell death execution domain of Bab, which is distantly related to pore-forming domains found in fungi, animals and plants. We show that Bab and HET-S, a fungal amyloid-controlled regulated cell death execution protein from Podospora anserina, are functionally interchangeable. These findings show that amyloid-mediated immune signalling is conserved across kingdoms.

Indexed as

AmyloidColiphagesEscherichia coliEscherichia coli ProteinsFungal ProteinsPodosporaSignal TransductionAmyloidEscherichia coli ProteinsFungal Proteins

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.