Evidence map›Paper›PMID 40811347›Full record

ArticlePloS one2025

Comparative proteomics of HepG2 cells reveals NGLY1 as an important regulator of ferroptosis resistance and iron uptake.

Stuart Emmerson, Haruhiko Fujihira, Takehiro Suzuki, Naoshi Dohmae, Peter Greimel, Yoshio Hirabayashi, Tadashi Suzuki

Abstract readComparative Study
In one paragraph

Article in PloS one, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Stuart EmmersonGlycometabolic Biochemistry Laboratory, Pioneering Research Institute, RIKEN, Wako, Saitama, Japan.
Haruhiko FujihiraGlycometabolic Biochemistry Laboratory, Pioneering Research Institute, RIKEN, Wako, Saitama, Japan.ORCID https://orcid.org/0009-0001-6500-7823
Takehiro SuzukiBiomolecular Characterization Unit, Technology Platform Division, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.ORCID https://orcid.org/0000-0002-0585-6305
Naoshi DohmaeBiomolecular Characterization Unit, Technology Platform Division, RIKEN Center for Sustainable Resource Science, Wako, Saitama, Japan.
Peter GreimelLaboratory for Cell Function Dynamics, RIKEN Center for Brain Science, Wako, Saitama, Japan.ORCID https://orcid.org/0000-0002-4931-6183
Yoshio HirabayashiInstitute for Environmental and Gender-Specific Medicine, Juntendo University Graduate School of Medicine, Urayasu, Chiba, Japan.
Tadashi SuzukiGlycometabolic Biochemistry Laboratory, Pioneering Research Institute, RIKEN, Wako, Saitama, Japan.ORCID https://orcid.org/0000-0003-1030-7631

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

NGLY1 deficiency is a rare genetic disorder caused by mutations in the NGLY1 gene. This disorder presents a wide range of clinical symptoms, and its severity varies among affected individuals. Previous studies have focused on understanding the influence of NGLY1 on energy metabolism, revealing dysregulation in lipid metabolism following NGLY1 deletion. In this study, we investigated the consequences of the loss of NGLY1 on ferroptosis and iron homeostasis using human hepatocellular carcinoma cells, HepG2. Comparative proteomics analysis revealed significant alterations in protein quantities in NGLY1-deficient HepG2 cells, indicating that these cells are under "pro-ferroptotic" stress state. Moreover, dysregulated iron uptake and increased reactive oxygen species production were observed in the absence of NGLY1, indicating a novel perspective on the consequences of the loss of NGLY1. These findings provide important insights into the molecular pathways affected by NGLY1 deletion and may contribute to the development of potential therapeutic strategies for individuals with NGLY1 deficiency.

Indexed as

FerroptosisIronProteomicsHep G2 CellsHumansReactive Oxygen SpeciesIronReactive Oxygen Species

Identifiers

PMID40811347
PMCPMC12352660

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.